| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0878 |
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| Symbol | |
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| ID | 4245424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1391421 |
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| End bp | 1393301 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638106141 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_720753 |
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| Protein GI | 113474692 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.209414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.32606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTACG GTGGGTGGAT GTGGCGAAAA TTAGAGCAAA GCTTACCAGA AGTTGCCGAT
ATTTCCTCCT ATAGAAGAGA TGGTACTTTA ACGATCAAAG CTACAGATGG TAAAATTATA
CAACAAACCG GACCTGCCAC TCGAGAAAAA ATTAAATTAC AAGATATTCC TACTCCTTTA
GTTCAAGCTT TTATTGCTGT TGAAGACAGA CGTTTCTATG AACATAGAGG AGTTGATTAT
CCAGGAGTTA TTCGAGCATT TATATTGAAT ATAATTGCTA GAGATATAGT TCAAGGGGGT
AGCACTATTA CCCAACAGTT AGCACGGATG GTTTTCCTTG ATATGGAACA AAGTATTTGG
CGTAAACTTC GGGAAGCAAT GCTAGCTTGG AAAATAGAAA ATGAGCTATC TAAAGAAGAA
ATTCTAGAAT TATATCTAAA TATAGTTTAT CTGGGGTCAG GTACTTATGG AGTCGCTGAT
GCAGCCTGGG TTTACTTTAG CCAACCAGTT TTCGGACTAA CTTTAGCACA AATGGCAACT
TTGGCAGGTT TGCCTCCTGC ACCCAGTCAA TATTCACCTT TGGTTAACGA AGAAGCTGCT
AAACGTCGGC GAAATCTAGT ATTAAAAGAA ATGCAAGCAG CAGGTTTGAT TTCTGATGAG
CGAACAAAAA GAGCGATCGC TCAACCAATG AAAATAAAAC CTAGTGCGCC AAAACGTCTC
ATAGTTGAAG CTCCATATTT TGCTAACTAT ATTCAGAAAG AGTTACCGAA ATATGTTTCC
TCAGAAGTTA TAATGGCAGG AGGTTTAACT GTAGAAACTA CTCTGGATAG GCGTTGGCAA
GAAATAGGGG AAAAAGTAAT TCAAGAAGCT GTTGATATTG ATGGTTATCG TCAAAGGTTT
GACCAAGCAG CATTAGTCGC TATTGATGCT AATACTGGAG AGGTTAAGGC GTTAGTAGGA
GGTCGAGATT TTGCTAAGAG TGAATTTAAC CGAGCTATTC AAGCGCAACG TCAACCAGGT
TCAACTTTTA AAAGTTTTGT CTATGCTGCT GCGGTTGCTG CTGGTATTCC TCCGACTAAT
GGTTATCGAG ATTTACCGTT TACAGTAGAT GGTTATAAAC CCAAAAATTA TGGTAAAAAG
TATGGTGGTT GGCGATCAAT GATTGATTCT TTGGCATATT CTGTAAATGT GGTGGCAGTG
CAGGTGTTGA TAGATGTAGG GTTTGAACCT GTGATTAATT TAGCTAAGGA TATGGGGATT
AAATCTGAGG TTAAGGCTAC TTATTCTATG GCGTTGGGTA GTTGGGAGGT TAATTTATTA
GAGCTGACAA ATGCTTATGC GACTTTTGCT GCACAGGGTA AGTATATTCC AGCTCATGGA
ATCAAAAAAG TAATTAATCA AAACGGTAAG GTTATCTATG AGAGTAATTT TAAACCAAAG
CAGGTGTTAG ATAAGGATAG TGCGGCAATT GTTACCTGGA TGTTGGAGAA TGTGGTGAAA
TATGGTAGCG GAGCGAATGC TTATTTGTCT GATCGCCCTG TTGCAGGTAA AACTGGTACG
ACTGAAGAGG CCCGAGATTT GTGGTTTATT GGTTATATTC CCCAAGTGGC AACTGGAATT
TGGTTTGGTA ATGATGATAA TAAACCTACT TGGGGTGTGA GTAGTACAGC AGCTTATAAT
TGGCAACAGT TTATGAGGAA AGTAGCTAAA GATATACCTG TGAAAAATTT TCCGAAAAAG
CCCAGTTTTT ACGATCGCAA ACCTACTATT GAATCTAAAC CAGTGACACC AAGATGGACT
AGGTATGGGA ATGTTGGGCC TGATGGTAGG GAGTTAGAAA AAAGAAATTA TTATAGAGAT
TATTATGATG GGAGTTATTA G
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| Protein sequence | MIYGGWMWRK LEQSLPEVAD ISSYRRDGTL TIKATDGKII QQTGPATREK IKLQDIPTPL
VQAFIAVEDR RFYEHRGVDY PGVIRAFILN IIARDIVQGG STITQQLARM VFLDMEQSIW
RKLREAMLAW KIENELSKEE ILELYLNIVY LGSGTYGVAD AAWVYFSQPV FGLTLAQMAT
LAGLPPAPSQ YSPLVNEEAA KRRRNLVLKE MQAAGLISDE RTKRAIAQPM KIKPSAPKRL
IVEAPYFANY IQKELPKYVS SEVIMAGGLT VETTLDRRWQ EIGEKVIQEA VDIDGYRQRF
DQAALVAIDA NTGEVKALVG GRDFAKSEFN RAIQAQRQPG STFKSFVYAA AVAAGIPPTN
GYRDLPFTVD GYKPKNYGKK YGGWRSMIDS LAYSVNVVAV QVLIDVGFEP VINLAKDMGI
KSEVKATYSM ALGSWEVNLL ELTNAYATFA AQGKYIPAHG IKKVINQNGK VIYESNFKPK
QVLDKDSAAI VTWMLENVVK YGSGANAYLS DRPVAGKTGT TEEARDLWFI GYIPQVATGI
WFGNDDNKPT WGVSSTAAYN WQQFMRKVAK DIPVKNFPKK PSFYDRKPTI ESKPVTPRWT
RYGNVGPDGR ELEKRNYYRD YYDGSY
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