| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0838 |
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| Symbol | |
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| ID | 4243132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 1332219 |
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| End bp | 1333871 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638106112 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_720724 |
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| Protein GI | 113474663 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.832217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATTA CCTTTAACAA ATTCGTCAAA TATGCCCCCA GTGTTCTCAG TATCACATTA
TTTATAGCAA ATCCTGCAGA GGCTAACCGA CCAATACAAA TTTCTCAAGC ATTTCGTTCA
CTACCGATAG ATGATCCCTC ATTAGAAATT CCCAGTGTAT CTGAGCTAGC AGTAGAAGAG
GCAATAGATC AGGTAACATC TGTCTCTCAA TTATCAGATG TACAGCCTAC AGACTGGGCA
TTCCAAGCAT TACAATCATT AGTAGAACGT TATGGTTGTA TAGCAGGTTA TCCCAATGGA
ACCTACAAAG GCAACCGGGC CATGACTCGC TTTGAATTTG CTGCAGGATT AAATGCTTGC
CTAGACAGAA TCACAGAATT AACTGCAGCA GCAACCAGTA ACCTAGTGAC TAGAGAAGAC
TTAGCTATAT TGCAACGTTT ACAAGAAGAA TTTGCAACCG AACTAGCAGT ATTGCGCGGT
CGTATAGATT CTTTAGAAGC ACGCACAGCA GAACTAGAAA ATAACCAATT TTCCACAACA
ACCAAACTCA ATGGTGAAAT TCTGTTTTGG TTAAGTGATA CCCTCGGAGA AAGAGCAAAT
GCCCGTGGAG AGTCTTCTGG CAATAACAAA ACTCAGACTT TCTTTTCTTA TCGCACCTGG
TTACACTTTG AGAGTAGCTT TACTGGAGAA GATTTGCTAT TCACCCGTCT ACAAGCTAAT
AATACTTACG ATTTGAGTGA GCCAGATCTT ACCAATACTT TAATGACTCG TACTGCCATT
GATGAAGCTG ATAGTAATGA TAATTTTGGT ATTGACCTGA TGTTCTATCA ATTTCCCATT
GGCGATCGCG CCCAAGCCAT CATCGGCCCT ATTGGAGTTG ACCTAGATGA CGTTTCCACA
GTTCTGTCAC CCTTTGCAGA AGAAGGGGAT GGTACCATTT CTAGATTTGG ACGACGCAAC
CCTACCAGTT TCCGCGGTCC GGCTAATGCA GCTCTTGGTT TTAGCTACGC ATTTAATGAT
ATGTTTATGG TCAATGTTGC TTACTTAACA GACGATCCAG CAAATCCTGC TGAAGGTGCG
GGTGCATTCA ATGGGGCTTA CAGTGCATTA GGTCAACTTA TAATTGAACC TAATGATACC
TTGGCATTTA CCTTGGGTTA TGTTCGTAAA TATTGGGGTA AGGATGGGGT GGATATTACT
AATGGGACTG GTAGTTTCAA AGCTCAAGAC CCCTTTGATG GTCTTTCCAC AACTGCTGAT
AATGTTGGGT TACAAGCTCA TTGGAGAGTC AATGAAAAGT TTGAGATAGG AGGTTGGTTT
GGTTCCACCT GGGCGCGGCC GGAAACTAGC AATGGTGATG AAGACGATAT TACTATTATT
AATGGAATGT TATATTTTGC TTTCCCAGAT TTGTTGATAG AAGGAAATTT GGGTGGTTTG
ATGGTTGGTG TACCTCCTAT TGTTACTGAT GGTGGTGATG ATGATTCATT GAAAGATGAT
GATACATCTA TACATATAGA GGCAATTTAT CGTTTTCAAA TTAATGATAA TATTTCTTTG
ACTCCTGGTT TATTTGTGAT TACAAATCCT AATCATGATG ATGTTAATGA TACTATTTGG
ATAAGTACAT TCCGAACTCA GTTTGTATTT TAA
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| Protein sequence | MKITFNKFVK YAPSVLSITL FIANPAEANR PIQISQAFRS LPIDDPSLEI PSVSELAVEE
AIDQVTSVSQ LSDVQPTDWA FQALQSLVER YGCIAGYPNG TYKGNRAMTR FEFAAGLNAC
LDRITELTAA ATSNLVTRED LAILQRLQEE FATELAVLRG RIDSLEARTA ELENNQFSTT
TKLNGEILFW LSDTLGERAN ARGESSGNNK TQTFFSYRTW LHFESSFTGE DLLFTRLQAN
NTYDLSEPDL TNTLMTRTAI DEADSNDNFG IDLMFYQFPI GDRAQAIIGP IGVDLDDVST
VLSPFAEEGD GTISRFGRRN PTSFRGPANA ALGFSYAFND MFMVNVAYLT DDPANPAEGA
GAFNGAYSAL GQLIIEPNDT LAFTLGYVRK YWGKDGVDIT NGTGSFKAQD PFDGLSTTAD
NVGLQAHWRV NEKFEIGGWF GSTWARPETS NGDEDDITII NGMLYFAFPD LLIEGNLGGL
MVGVPPIVTD GGDDDSLKDD DTSIHIEAIY RFQINDNISL TPGLFVITNP NHDDVNDTIW
ISTFRTQFVF
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