| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0808 |
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| Symbol | def |
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| ID | 4241771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1284063 |
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| End bp | 1284626 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638106086 |
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| Product | peptide deformylase |
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| Protein accession | YP_720698 |
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| Protein GI | 113474637 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTCTG AAATTATAGT TAACAAAGAA AAATTAGAAA ACTCGCCTTT AGAAATATAT
TATTTAGGCG ATCGCTCTTT ACGCCAGTCA GCCAAGCGAG TCGCTAAAGT AGATAGTGAT
ATGAGGAAAC TAGTGCGAGA AATGCTCCAA ACTATGTATA CTGCTGATGG TATTGGTCTC
GCTGCACCCC AGGTTAATGT CCAAAAGCAA GTTATTGTTA TAGACTGTGA GCCTACTAAT
TCTGCTACTC CTCCTCTAGT TTTAATTAAT CCTACAATTA AAAAGTACAG CAATGATATT
TGTCTTTTCC AAGAAGGATG TCTGAGTATT CCTGGGGTTT ATTTGGATGT TCAACGTCCC
TCAGAGATTG AAGTTGCCTA TAAAGACGAA AATGGCCGTC CTCAAACTCT TCAGGCTCAA
GAATTATTAT CTAGGGCAAT TCAACATGAA ATGGATCATC TTCAAGGTAT CCTTTTTGTA
GACCGAGTAG AAAATAAATT GGCACTGAAT GAAGAGTTGG CCAAGTATAA GTTTTCTGCC
AAAGATGTTA GATCTATTGC TTAA
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| Protein sequence | MDSEIIVNKE KLENSPLEIY YLGDRSLRQS AKRVAKVDSD MRKLVREMLQ TMYTADGIGL
AAPQVNVQKQ VIVIDCEPTN SATPPLVLIN PTIKKYSNDI CLFQEGCLSI PGVYLDVQRP
SEIEVAYKDE NGRPQTLQAQ ELLSRAIQHE MDHLQGILFV DRVENKLALN EELAKYKFSA
KDVRSIA
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