Gene Tery_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0800 
Symbol 
ID4243211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1267524 
End bp1269053 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content30% 
IMG OID638106078 
ProductABC transporter related 
Protein accessionYP_720690 
Protein GI113474629 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGAG AAGAATTCAA GACGAAGTAT GCTTTAGAAA TGACTAATAT CTCTAAAACT 
TTTTCTGGAG TACAAGCATT ATCTGGAGCA ATATTAAAAG TGAGACCTGG TACAGTACAT
TCATTAGTTG GTGAGAATGG TGCTGGAAAA TCAACTTTAA TGAAATGTTT GTTTGGTATT
TATAAGTTGG ATGCAGGTGA AATTTATTTG TCTGGAAAAA GGGTAAAAAT TTTCAGCCCT
CAACAAGCAT TAAGGTATGG TGTTTCAATG GTTCACCAAG AACTTAATCA AGTCAGACAA
ATGAATATTA TGGATAATAT TTGGCTAGGA AGATATCCTA TAAAGGGAAT ATTTATTGAT
ACAATAAAGT GTTTTAAAGA TACTAAAAAT CTGTTTGAAA AACTTAGTAT AGAACTTAAC
CCTAAACGAA ATGTTAGTTC TTTGAGTATA TCAGAAATGC AATTGGTAGA AATTGCTAAA
GCAGTTTCTT CTAATTCTAA AATTATTGTC ATGGATGAAC CAACTTCATC TTTAACGGTA
ACAGAAGTAG AGCATTTATT TTCAATTATT AATCAATTAA AAAATCAAAA TGTAGGAGTT
ATTTATATCT CTCATAAAAT TGAGGAAGTT TTAAATATTT CTGATGAAAT AACCATTATG
AGAGATGGTT TTTGTATAGC AACTAAACCA TCTCAAGATT TAACCAAATC TGAAATTATA
GAGATGATGG TTAATAGAAA ATTATCTAGT TTATTTCCTC ATAAAACTTG TCAACTAGGT
AAGGTTATTT TAGAAGTTAA AAATTTAACT GCTTATACTC AACCTTCGAT TAAGGATATT
AACTTTGAAT TAAAAGCAGG AGAAATTTTA GGAATAGCTG GACTTGTAGG AGCAAAAAGA
ACAGATATTC TTGAGGGAAT ATTTGGCATC AGAAAAGTCA GTTCAGGAGA AATACTTTTA
GAGGGTAAAA AAATTGATAA TTCTAGAATT AATAAAGTGA TTTCTCAGGG ATTTGCTTTA
GTAACTGAAG AGAGAAGAAG TACGGGTATT TTTGATAGTT TATCAGTAAG TTTTAATGCC
ACAATTGCTA ATATTAATTA TTATGTGAAT AGCTGGGGTT TACTATCCGA AAAAAAAATT
CGACAACACA CTCAAGAAAT AATTGATTCA ATGGGAGTAA AAACACCTTC ACAAAAAACT
TTAATTGGGA AATTATCTGG TGGAAATCAA CAAAAGGTAA TAATTGGACG TTGGTTATTA
ACTAAACCAA AAATTTTGAT GTTGGATGAG CCAACAAGAG GGATAGATGT GGGGGCTAAA
TATGAAATAT ATAAGTTAAT AAATGATTTA GCTAATGAAG GTATGGGAAT TATTATGGTA
TCTTCAGAAA TGTCAGAATT ATTGGGAGTT ACTGATAGAA TTTTAGTTAT GAGTAACGGT
AAAGTTGCAG GTATAGTTGA ATCAAAAAAA ATGACTCAAA ACAATAGGAT TCAAGAGGAA
ATTATGGGTT TATCTGGGTT GTATTTATAA
 
Protein sequence
MVGEEFKTKY ALEMTNISKT FSGVQALSGA ILKVRPGTVH SLVGENGAGK STLMKCLFGI 
YKLDAGEIYL SGKRVKIFSP QQALRYGVSM VHQELNQVRQ MNIMDNIWLG RYPIKGIFID
TIKCFKDTKN LFEKLSIELN PKRNVSSLSI SEMQLVEIAK AVSSNSKIIV MDEPTSSLTV
TEVEHLFSII NQLKNQNVGV IYISHKIEEV LNISDEITIM RDGFCIATKP SQDLTKSEII
EMMVNRKLSS LFPHKTCQLG KVILEVKNLT AYTQPSIKDI NFELKAGEIL GIAGLVGAKR
TDILEGIFGI RKVSSGEILL EGKKIDNSRI NKVISQGFAL VTEERRSTGI FDSLSVSFNA
TIANINYYVN SWGLLSEKKI RQHTQEIIDS MGVKTPSQKT LIGKLSGGNQ QKVIIGRWLL
TKPKILMLDE PTRGIDVGAK YEIYKLINDL ANEGMGIIMV SSEMSELLGV TDRILVMSNG
KVAGIVESKK MTQNNRIQEE IMGLSGLYL