Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0765 |
Symbol | |
ID | 4243000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 1223413 |
End bp | 1226955 |
Gene Length | 3543 bp |
Protein Length | 1180 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638106053 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_720665 |
Protein GI | 113474604 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.82828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGTTGA CGGGAGGAGG CGGAGTTGGT AAATCTGCTT TAGCTTATCA TTTTGCTACT GTCCATCGGT ATGAGTTTCC TGACGGAGTG ATAGGTTTGC GAGTGGATAA AAAGGATGTC AATAGTATTG CCCGTCAGTT GGCGAGAATC ATTGGCCATC CTATTGATGA GGATGATGAT ATAGAAGCTA GGGAGATTAT GCAAAGGTTC TTTGCTCCCA GGCGGATGTT GCTGATTTTT GATAATGCGG AAGAGGCGAA AATTAAGGTA CTACGTCCGG GGGGAAACCG TTGTGCTATA ATTGTTACTA CTAGAAAGCA GAATTTGCCT GTTTCTTTGG ATTTGTCTGA AACTGCTACA ATTAGGTTAA GATCGCTCCC GGAAAATGAT GCTCTGGACT TACTGAGGAA TATTGTGGGT CAAAGTGAGA TTGATAATGC CTTAGCTGCA GCAAAACGGA TAGCTGAAGT TGTTGGTAGG TTACCTTTGG CCCTACAGGT TGCAGGTGGT ACTCTGCGGG GAAAAAGGCG ATCGCTGGCT ACTTATGCTG ATTCTCTACA AAGGCAAAAG GAGCAATTGA GACTTTTACC ACGACTACGC TTGGGGGAAG ATCCAGATTT TAATGTGGTA GCTTGTTTGA ATTTGAGTTT GGAGTTTTTG CAGGAGGAGG AAATTGATTT TTTTGCTTGT CTGGGGGTTT GTGGGGAGGA TGGGTTTGCT CTGAGAACGG CAATGGCAGC AGGGGGTTGT GAGGATGAGT TTGATGCTGA GGATTTTTTA AATAAGTTGT ATGAGGTATC GTTGTTGAAT TCTGAGGAAG TTCAACAGGA CCGTTTTGTA TTACATCCTT TGGTGCGGGA GTATGCTAGG TCTGTTGCTC AAGATAGGAA TTTGCTGAGT TTGGCTCAGG AACGTCATGC TCAGTTTTTT GTGGAGCGGT TACAGTTTGA TGATTTGGAG GATGAGACGG TTATTGCGGA AGTTGCTACA GATTTGAGTG ATGTGTTCTT AGCTGCTGAG TGGTTGCAGA GTTATTGGGG TCAGACGACG GAGAGTAGAA AGGAAGCTTA TGAATTTGTT TTAAAGTTGC AGCCGTTATT TGAACATTAT GGCTATTGGG AACAGGGAAT TAGTCTGATG GAAAGACTTC AAACTTGGGC AGAACAATTT GATGATTGGT ATACAATAGT TAGATGTCAA ATGCACCAAG GTCGGTATTG GTCTTTTGTA GAAGAATTTG AACGAGCAGA AGAAATCTTA ATTTCTGCAA AAGATATTTC ATCTGATGAT CAAAAAATTG AAGATATAGA TACGCGGGGG AAGCGCCATT CTAAAGTACT AAATGTACTA GGTGGTGTTT ATAAGAAACA AGGTAAGACG GAAAAAGCTA TTGAAACTTT TAAAGCACAA ATAGCAATTG ATGAAAGTCT TGATGATAAA AAGTCTCTTA CTATTGCTTG GAACCGTTTA GGAGGAGTGT TAGAAAAACA AGGTAAATTC AAGGAAGCAC AGCAGGCTTT TGAAACCGAA ATAGACCTCG CTAAAAGTAT TGATGACAAA CATGGACTTG CTATTGGCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGGTCAATTC AAGGAAGCAC AGCAGGCTTT TGAAAAGGGA ATAGAGCTGG CTAAAAGTCT TGATGACAAA CGTGAACTTG CTATTGCCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGGTAAATTC AAGGAAGCAC AGCACGCTTT TGAAAAGGGA ATAGAGCTGG CTAAAAGTCT TGATGACAAA CATCAACTTG CTATTGGCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGGTAAATTC AAGGAAGCAC AGGAGGCTTT TGAAAAGGAA ATAGAGCTGG CTAAAAGTCT TGATGACAAA CATGGACTTG CTATTGGCTG GAACCGTTTA GGAGGAGTGT TAGAAAAACA AGGTCAATTC AAGGAAGCAC AGCAGGCTTT TGAAAAGGGA ATAGAGCTGG CTAAAAGTCT TGATGACAAA CATGGACTTG CTATTGGCTG GAACCGTTTA GGAGGAGTGT TAGAAAAACA AGGTCAATTC AAGGAAGCAC AGCAGGCTTT TGAAAAGGGA ATAGAGCTGG CTAAAAGTCT TGATGACAAA CATCAACTTG CTATTGGCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGGTCAATTC AAGGAAGCAC AGCACGCTTT TGAAACCGAA ATAGACCTCG CTAAAAGTCT TGATGACAAA CATGGACTTG CTATTGGCTG GAATTGTTTA GGAGGAGTGT TAGAAAAACA AGAGAAACTC AAGGAAGCAG AGCACGCTTT TGAAAAAACA ATCAAGAATA CAGACTTCAA TCATAAACAG TCTCTTACTC TTGGCTGGAA GCGTTTAGAA AGAGTGCAAA AAAAGAGGAA ATTAAAGGAA GCACAACAAG CTTTGAAAGA ACAAATAGAG AACGCTAAAA GTCTGGATGA CCAAAAATCT CTTGCTATTA GCTGGAATTC TCTAGGAGAG TTGCTAAAAA AAGAGAGGAA ACTAGATGAA GCACAGCAGG CTTTTGAAAT AGTAATTAAT ATCAGCCAAA ATTTCAAAGA TCAATATTTT TTAACTGCGT GGGCATTACA TAATTTAGGC ATAATTTATA AATCAAAAAA AGAATTTGAA ACAGCCGAAA AATTCCTCAA GGAAAGCGTC GAAATTTTTA AAGATAACAA TTATTTACCA GGTTTAACAA AAGTGATGAG TACCCTAGGC AGTGTTCTAG AAAAACAACA GAAATGGAAA GAAGCAAAGA AAGTCTTAGA AGAAAGTTAC AGTTTTGCCG AAAAACTTGG GGATGAATTA GGACAAGCTA TTATAGCCAA TAGCTTAGGA CAAGTTATGG CTCATCTGGA AGAAGACGAA GCTCATGAGC GTTCCTTTAT GTACTTTAAC CAAAGCATTA AACTAGGAAA AAAACTAAAT AATGAACCTC ACCTAGCAAA AGTATATACA GCAAGAGGAA AAATATTTTG CAACCGCGGA CAGAACGAAC GCGCTGTTGA AGAATTGTCT CAAGGGTTTG AAATTGATGT CAAATTAGGC AACATCCGAG GTTTAAGGAT AATTATTCCC AGTATAACCC GTATTTTATC TACATTAGGA AAACAAGAAG AAGCATTAGC ATATTGTGAG CGGGCACTAA AAGTTGCTCC TAATAATACC AGTTTCCAAG AATTATATCA CAAAATTCAG AGAGCGATCG CCACAGGTAC TCAGCCAACC TTCTTTATAA CAGGTTCAGT GCAATACATT CGGTATGATA AAAAAGAAAA GTTATACAGG GGTAGAATTA GTCCAGATGA TGGAACCTTA GACATTTTCT TTAACGACAA ATACATGAAT ACTGAGTCTA TATCTCAATT AACCGAAGGA GAGTTAGTAG AAGTTGAGGT CAAAGAAAAA AATGGAAAAC GCTATGCAAA ACAAATTAGT GTAATTGAGG AAGAAGAAGA TGATGATTGG TAA
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Protein sequence | MGLTGGGGVG KSALAYHFAT VHRYEFPDGV IGLRVDKKDV NSIARQLARI IGHPIDEDDD IEAREIMQRF FAPRRMLLIF DNAEEAKIKV LRPGGNRCAI IVTTRKQNLP VSLDLSETAT IRLRSLPEND ALDLLRNIVG QSEIDNALAA AKRIAEVVGR LPLALQVAGG TLRGKRRSLA TYADSLQRQK EQLRLLPRLR LGEDPDFNVV ACLNLSLEFL QEEEIDFFAC LGVCGEDGFA LRTAMAAGGC EDEFDAEDFL NKLYEVSLLN SEEVQQDRFV LHPLVREYAR SVAQDRNLLS LAQERHAQFF VERLQFDDLE DETVIAEVAT DLSDVFLAAE WLQSYWGQTT ESRKEAYEFV LKLQPLFEHY GYWEQGISLM ERLQTWAEQF DDWYTIVRCQ MHQGRYWSFV EEFERAEEIL ISAKDISSDD QKIEDIDTRG KRHSKVLNVL GGVYKKQGKT EKAIETFKAQ IAIDESLDDK KSLTIAWNRL GGVLEKQGKF KEAQQAFETE IDLAKSIDDK HGLAIGWNCL GGVLEKQGQF KEAQQAFEKG IELAKSLDDK RELAIAWNCL GGVLEKQGKF KEAQHAFEKG IELAKSLDDK HQLAIGWNCL GGVLEKQGKF KEAQEAFEKE IELAKSLDDK HGLAIGWNRL GGVLEKQGQF KEAQQAFEKG IELAKSLDDK HGLAIGWNRL GGVLEKQGQF KEAQQAFEKG IELAKSLDDK HQLAIGWNCL GGVLEKQGQF KEAQHAFETE IDLAKSLDDK HGLAIGWNCL GGVLEKQEKL KEAEHAFEKT IKNTDFNHKQ SLTLGWKRLE RVQKKRKLKE AQQALKEQIE NAKSLDDQKS LAISWNSLGE LLKKERKLDE AQQAFEIVIN ISQNFKDQYF LTAWALHNLG IIYKSKKEFE TAEKFLKESV EIFKDNNYLP GLTKVMSTLG SVLEKQQKWK EAKKVLEESY SFAEKLGDEL GQAIIANSLG QVMAHLEEDE AHERSFMYFN QSIKLGKKLN NEPHLAKVYT ARGKIFCNRG QNERAVEELS QGFEIDVKLG NIRGLRIIIP SITRILSTLG KQEEALAYCE RALKVAPNNT SFQELYHKIQ RAIATGTQPT FFITGSVQYI RYDKKEKLYR GRISPDDGTL DIFFNDKYMN TESISQLTEG ELVEVEVKEK NGKRYAKQIS VIEEEEDDDW
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