Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0762 |
Symbol | |
ID | 4242997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1220571 |
End bp | 1221530 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638106050 |
Product | peptidase M48, Ste24p |
Protein accession | YP_720662 |
Protein GI | 113474601 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0736297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.841072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACCT ATACCGGAAT TTCTAGCGAA GCATTTCGCC ATCCCCTAGA TCGACAAGCT GAAGATGCAT TACGCAACGT ACCTGGATTT GACTTAATTG CCAGTAAATT TGTAGAATTT ATTTATAAAC GCCCACAATA TGTTTATTTA ATGGGCAATG GAATTAAAGT TGGGCCTCGT CAATATGCCA GTATCTATCA AATATTTCGA GGATGTGTTA TAGATTTAGA CATATCACCT GAACCGACCC TATTCGTCTC TCAAGATCCC CAAGTAAATA GTTATTCCCT AGGCAAAGAT CAACCCATTA TCGTTTTAAA TACTGGTCTC TTAGACTTAT TAAATCAAGC AGAATTAAAA ACCGTACTAG CTCACGAACT AGGACATATT AAGTGTGGCC ACCCAATCTT AAATCAGATG GCAACTTGGG CAATGGGTAT TGCTTCAGCG ATCACAGACG TAACTTTTGG TTTAGGTAAT TTAGTTAGCA GTGGGTTAAT TTTTGCCTTT TACGAGTGGC GACGCAAAGC TGAATTATCA GCAGATCGAG CTGCTCTTTT AGTCATGGAC GACCTAAATT TAGTTATGCA AACTATGATG AAAGTAGCTG GAGTCAGTAA TAAGTATGCA AATGAGTGTA GCCTAGAAGA GTTCATTCGT CAGTCTGATG ATTATCAAAG CCTAGACCAA GATGGCCTAA ATCAAGTTTA TAAATTTTTG CTTTACAATG GTGGTCAGGG TCTAATGTTG AGCCATCCTT TCCCAGTAGA ACGACTGCGC TACTTGCAAA ACTGGGCAAA TTCTGCTGAA TATCGTCAAA TTCATGCTGG TAACTATAAA TGTGCTACTA GTGAGGGTGC TGTTGAGGTC GAAGTAAACT CTCCAGAAAA TGAAGCAGAT GCTTTGCGTC GTGAAATTCA AGACTTAAAA CAAGAAATTA ACCGGATAAA GTCAAGATAA
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Protein sequence | MPTYTGISSE AFRHPLDRQA EDALRNVPGF DLIASKFVEF IYKRPQYVYL MGNGIKVGPR QYASIYQIFR GCVIDLDISP EPTLFVSQDP QVNSYSLGKD QPIIVLNTGL LDLLNQAELK TVLAHELGHI KCGHPILNQM ATWAMGIASA ITDVTFGLGN LVSSGLIFAF YEWRRKAELS ADRAALLVMD DLNLVMQTMM KVAGVSNKYA NECSLEEFIR QSDDYQSLDQ DGLNQVYKFL LYNGGQGLML SHPFPVERLR YLQNWANSAE YRQIHAGNYK CATSEGAVEV EVNSPENEAD ALRREIQDLK QEINRIKSR
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