| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0712 |
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| Symbol | hrcA |
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| ID | 4242502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 1150922 |
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| End bp | 1152034 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638106005 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_720618 |
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| Protein GI | 113474557 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0259646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATTAC AAGTTAAGCT TAATAATCGT CATCAACATA TTCTCTGGGC AACAGTTCGC
CACTATATTG CGACAGCAGA GCCAGTTGGC TCAAAATCCC TTGTAGAAGA GTATAATCTC
AGTGTTAGTC CAGCGACAAT TCGCAATGGG ATGAGCTTTT TAGAGAAAAG CGGACTATTA
TATCAACCTC ATACTTCGGC TGGAAGAATT CCATCGGACT CAGGTTACCG AATATATGTT
GACCAATTAA TTAGACCTTC AGAAAATCTA GCTTTTGAAA TTGAAGAGCT TTTACAAAAG
CAACTAAATT GGCCAGAAGG TCGCCTAGAA GTTGTACTTC AAGGAGCCGC TCAAATTTTA
GCTAGCCTCA GTGGTTATAT TACTCTGGTG ACAATGCCCC AAACTTCGAC GGCTAAGCTA
CGACATCTAC AATTGGTACA AGTGGAAGCA GAGAAAATCA TGCTAATTGT AGTGACAAAT
ACCTATGAAA CTCAATCACT GATTATGGAC TTAAAGACAA TAAATCAGAT AAATGATCGC
AAAAATTTAC AGGGTAATTC TGCCGTCCCC AATTTAGAAG ATATTGATCG AGAATTACAA
ATATTATCAA ATTTTTTGAA TAGTCAGCTA AAAGGACGAG TAATAGGGGA ATTATCTTTA
TTGGACTGGA GTGAGCTAGA CTGGGAGTTT GAGAAATACG CTAAATTGAT CAAAAATCTG
TTGGAAAATT TAACTCTGCG TTGTGGAACG CCTAAATATA CTAGAATATT AATTAGCGGT
ATAGCAGAAG CACTACGTTT GCCAGAATTC TCCCAACTTG AACAGGTCCA AACTATTATT
CAACTACTTG AAGAAAAACA AGATAAATTG TGGCCTTTGA TATTTGGAAG TACTACTAAA
AAAACAGATC GACAGGTGAG AGTTACAATT GGTTCAGAAA ATCCTTTGGA ACCTATTCAA
GGTTGTGCCT TAGTTTCTGC AACTTATGGA AATGGGACAG TTCCTCTAGG AAGTGTGGGA
GTTTTAGGAC CGACTAGGAT GGTCTATGAG AATGCGATCG TTCTAGTTAA ATCTACGGCG
GATTTTCTAT CGGAAGCAAT GGGAAGTTAT TAA
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| Protein sequence | MSLQVKLNNR HQHILWATVR HYIATAEPVG SKSLVEEYNL SVSPATIRNG MSFLEKSGLL
YQPHTSAGRI PSDSGYRIYV DQLIRPSENL AFEIEELLQK QLNWPEGRLE VVLQGAAQIL
ASLSGYITLV TMPQTSTAKL RHLQLVQVEA EKIMLIVVTN TYETQSLIMD LKTINQINDR
KNLQGNSAVP NLEDIDRELQ ILSNFLNSQL KGRVIGELSL LDWSELDWEF EKYAKLIKNL
LENLTLRCGT PKYTRILISG IAEALRLPEF SQLEQVQTII QLLEEKQDKL WPLIFGSTTK
KTDRQVRVTI GSENPLEPIQ GCALVSATYG NGTVPLGSVG VLGPTRMVYE NAIVLVKSTA
DFLSEAMGSY
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