Gene Tery_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0683 
Symbol 
ID4242822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp1115549 
End bp1116691 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content37% 
IMG OID638105980 
Producttransaldolase 
Protein accessionYP_720593 
Protein GI113474532 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00876] transaldolase, mycobacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0936811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACTA ATCATTTGCT GGAAATCGAA AACCTAGGAC AGAGTATCTG GATGGATAAT 
CTGAGTCGCA ATATAATTGA GTCTGGAGAA CTCAAGAGCA TGATTGGCAA GAAAGGAATT
CGTGGCATTA CTTCTAATCC TGCGATCTTT GAAAAGGCGA TCGCTGGTAA TGCTATCTAT
GATGCAGATA TTGAAGCTGG CATCAAGGCT AGTAAGTCAG TGATTGAAAT ATACGAATCT
CTTGTGTTTA AGGATATTCG TGATGCTTGT GATATATTTA TGCCAGTGTA TGAAGAGACT
AAAGGGTTGG ATGGTTATAT TAGTATAGAG GTACCACCAA CTATTGCTAA AGATACAGAA
AGTACTATCA GCGAAGCAAT TCGTTATTAC ACGGCTATCG GTCGCGAAAA TCTAATGATT
AAAATTCCTG GTACTCCAGA AGGTTTACCA GCTGTGACGC GAGTGATTAG TGAGGGGATA
AATGTAAATG TCACTTTACT GTTCTCTGTA GAAAGCTATA TAAATACAGC TTGGGCTTAT
ATTGAAGGTT TAGAAGCTAG AGCTGCTAAA GGAGAGGATA TTGATAAGAT AGCTTCTGTG
GCAAGTTTTT TTCTAAGTCG CATTGATAGT AATATTGATG GTTTAATTGA TGAAAAACTC
AAGAAGGTAA CAGATGAAAC TGTTAAAGCA AAATTAGAAG CAGTTAAAGG AAAAGTAGCG
ATCGCTAATG CTAAAATCGC TTATCAAGAA TACAAAAAAA TTATTCAAAG CGATCGCTGG
AAAGCTTTAT CAGCAAAAGG AGCAAAAGAG CAAAGACTTT TATGGGCAAG CACTAGCACC
AAAAATCCAG CCTACAGTGA TGTCATGTAT GTTGACGAAT TAATTGGACC TAACACAGTC
AATACCTTGC CCCCCCCAAC GATAGATGCT TGTGCTGACC ATTGTGATGT TGACAACCGA
GTTGAGACCA ACATTGAAGT GACAAAGGAG GTTATGGAGA ATCTCAAAGA TCCTGATATT
AATATTAACA TTGATCAAGT AATGGAGCAA CTCCTAGTAG AAGGAATTGA TAAATTTATC
AAACCCTTTA CTTCTCTAAT CAATTCCTTA GAAGAAAAAG TTAAAAAATT AACGCCTGTT
TGA
 
Protein sequence
MVTNHLLEIE NLGQSIWMDN LSRNIIESGE LKSMIGKKGI RGITSNPAIF EKAIAGNAIY 
DADIEAGIKA SKSVIEIYES LVFKDIRDAC DIFMPVYEET KGLDGYISIE VPPTIAKDTE
STISEAIRYY TAIGRENLMI KIPGTPEGLP AVTRVISEGI NVNVTLLFSV ESYINTAWAY
IEGLEARAAK GEDIDKIASV ASFFLSRIDS NIDGLIDEKL KKVTDETVKA KLEAVKGKVA
IANAKIAYQE YKKIIQSDRW KALSAKGAKE QRLLWASTST KNPAYSDVMY VDELIGPNTV
NTLPPPTIDA CADHCDVDNR VETNIEVTKE VMENLKDPDI NINIDQVMEQ LLVEGIDKFI
KPFTSLINSL EEKVKKLTPV