| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0665 |
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| Symbol | |
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| ID | 4243172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 1091046 |
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| End bp | 1093646 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638105964 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_720577 |
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| Protein GI | 113474516 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.550803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA TACAAAAAAA ATCTGAAGAA CTATGGGAAA TTTTTACTAA GTTAATTCCA
GCAGCAATAT TGATTAGTCG TGCAGTTGAT GGTATAATTA TCTTCCACAA TGAATTTTTG
GGAGTAATTT TTGGCCTTTC TAATTATAAC TTTATCGGTT TTCCAACATC TAATTTTTAC
TTTAGCCCTC AAGAATATGA GTTTTTGTTA GCAAACTTCT ATGGAGAAGT TATGCTGCCG
AATTCCAAAA AAAAACAGAC ATTTGATTGC GAGGTATACT TAAAAAAAAT AGATGGCACA
CCATTTTGGG CTAAAGTATC AATGTCTTAT ATCAAATTCA ATGGCGAAAC TGCAATACTT
TCTGTCTTGT CACCTTCGTT GGAAGATACA CTTATTCAAA GATCACTGCA AAAAAAAGCT
TTAATTTTTG AGTATCTCTA CGATGGAGTA ATTCTGACAG ATACTCAGGG TAATATCGTT
GACTGGAACT CAGCAGCAAC CCGAATGTTT GGTTATAGTA AAACTGAGGT ATTAGGGAAG
AGTCCAGCTA TTTTACACAA ACCAGAAATA GCATCTGTGT TAACAAAGGA AATCATAGAA
AGGATCAAAG TCAATGATAA GTGGATAGGA GAAATTAATT TTATTCGCAA AGATGGCAGT
GAGGGTATAT GTGAAACAAC AGTTGTACCA ATATTAGATC AACAGAATCA AATGGTTGGA
AGTATAGGAG TTAATAGAGA TATAACTCAA CAAAAACGAG CGCAAGAGTT TGCACTCCAA
CAGGCAGAGG CAGCACTCAA AGAAAGTGAA GAACGTTACC ACCGTTTGGT CAAGAACTCA
CCAGAAGCGA TCGCTGTCAA CTACATGGAA AAAATTGTCT ATATAAATGC TGCTGGAGCT
AAATTATTTG GGGCAAATTG CCCAGACGAA ATCATTGGTC AATTACTTCG GAAATTCATT
CCTTCAGAGC TTATAGAAAC AGAAAAACAG CGACTGCAAC AAGTTCAAGA ACAAGGCATG
GAAACACATT TACAAGAAGA AAAGTTGATT AAACTAAATG GAGAAATCAT AGATGTAGAA
ATACTGGGAA TACCTTATAC TTATGATGGG AAAGCAGCAA CACAGATAAT TCTTAAAGAT
ATCACCCACC GCAAAAAAAC ACAGGCTAAA CTTGTTTATG ATGCACTTCA TGATACACTC
ACAGGTTTAC CAAACCGAGC ATTGTTTTTT GAACGATTAA AATTAGCATT ATGTCGGTCT
AGAAAACAAC CAAACTATCA ATTTAATGTG CTTTTTCTAG ATTTAGATCG CTTTAAAGTT
ATTAATGATA GTTTAGGACA TACTATTGGA GATAGGCTAT TAATAGCGAT CAGTAAGCGG
CTACAAAACT GTATCAAAGC TTCAGATACT CTGGCCAGAT TAGGAGGAGA CGAATTCACG
ATCTTACTAG AGTCTCCATC TAATTTGCAA GATGCTACTA AAGTAGCTGG GAGAATTCAT
CAAGAACTTG TTAGACCAAT TTACTTGGAA GGAAATGAAA TATTTACTAC AGCAAGTATT
GGTATTGTTA CTAACCGCAG AAATTTTATT GAGGATATTG ATGAAAATCA TCCCCTTATT
TGTCCTATTT ACAACAAGCC GGAAGATTTG CTGCGAGATG CAGACATTGC TATGTATCGA
GCTAAGACTT TAGGGAAAGC AAGGCATGAG GTGTTTGATT TGACAATGCA CAGGGAAGCT
ATCTCTTTAT TACAACTGGA AAACGATCTA CGACGGGCAA TAGAAATAAT TAAACAAAAT
CCGGTAAATT CTCAATTTAT CTTAAATTAC CAACCAATTA TCTGTTTAAA TACAGGTATA
ATTACTGGTT TTGAATCTTT GCTACGTTGG GCTCATCCTA CCAGAGGCTT GATTTATCCA
GGACAATTTA TCCCTCTAGC AGAAGAAACA GGTTTAATTG TACCTTTAGG AATGTGGATA
TTGCGATCTG TTTGTCATCA GTTAACTACT TGGCAGCAAG AATGTAGTAC TAAATATGAT
TCTGGTTGCT GTATGTATTC TAGTTGTCAA TTTCCTACTG ATAATTTTAC CGTGAGTGTC
AATCTTTCTA GTAAGCATCT TTCACAACCA AATTTATTGG AAGAAATTAA CACAATTTTG
GAAGAAACAA ATTGTCAACC TAGTTATTTG GAACTGGAAA TAACTGAAAC TTTAATTATG
GAAAATGTTA GTTTAGCAAC TCAAATTTTG AATAAACTGA AAAATAAAAA TATTAAATTA
TTAATTGATG ATTTTGGTAC AGGTTATTCA TCATTAAGTT ATCTACATCA ATTCCCTATT
GATAGTATTA AAATTGATAG GTCTTTTGTG AGTAGATTAG ACTCGGATAC AAGTGGTCAA
ACTTGTAAAA TTGTGGGTGC TATTATTGGA TTAGCTAATA ATTTAGGTTT AGAAATAATT
GCAGAAGGAA TAGAAACTCG AACTCAAATG CAAAAACTTA AGAAACTTCA ATGTAACAAA
GGACAAGGAT ATTTATTCTC AAAACCATTG GAAGGTGAGG ATGCAACTAA ACTACTTCGT
AATTTTAAGT TTCAAGTGTA A
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| Protein sequence | MEKIQKKSEE LWEIFTKLIP AAILISRAVD GIIIFHNEFL GVIFGLSNYN FIGFPTSNFY
FSPQEYEFLL ANFYGEVMLP NSKKKQTFDC EVYLKKIDGT PFWAKVSMSY IKFNGETAIL
SVLSPSLEDT LIQRSLQKKA LIFEYLYDGV ILTDTQGNIV DWNSAATRMF GYSKTEVLGK
SPAILHKPEI ASVLTKEIIE RIKVNDKWIG EINFIRKDGS EGICETTVVP ILDQQNQMVG
SIGVNRDITQ QKRAQEFALQ QAEAALKESE ERYHRLVKNS PEAIAVNYME KIVYINAAGA
KLFGANCPDE IIGQLLRKFI PSELIETEKQ RLQQVQEQGM ETHLQEEKLI KLNGEIIDVE
ILGIPYTYDG KAATQIILKD ITHRKKTQAK LVYDALHDTL TGLPNRALFF ERLKLALCRS
RKQPNYQFNV LFLDLDRFKV INDSLGHTIG DRLLIAISKR LQNCIKASDT LARLGGDEFT
ILLESPSNLQ DATKVAGRIH QELVRPIYLE GNEIFTTASI GIVTNRRNFI EDIDENHPLI
CPIYNKPEDL LRDADIAMYR AKTLGKARHE VFDLTMHREA ISLLQLENDL RRAIEIIKQN
PVNSQFILNY QPIICLNTGI ITGFESLLRW AHPTRGLIYP GQFIPLAEET GLIVPLGMWI
LRSVCHQLTT WQQECSTKYD SGCCMYSSCQ FPTDNFTVSV NLSSKHLSQP NLLEEINTIL
EETNCQPSYL ELEITETLIM ENVSLATQIL NKLKNKNIKL LIDDFGTGYS SLSYLHQFPI
DSIKIDRSFV SRLDSDTSGQ TCKIVGAIIG LANNLGLEII AEGIETRTQM QKLKKLQCNK
GQGYLFSKPL EGEDATKLLR NFKFQV
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