| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0657 |
|---|
| Symbol | |
|---|
| ID | 4243164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 1070417 |
|---|
| End bp | 1073758 |
|---|
| Gene Length | 3342 bp |
|---|
| Protein Length | 1113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638105956 |
|---|
| Product | Na-Ca exchanger/integrin-beta4 |
|---|
| Protein accession | YP_720569 |
|---|
| Protein GI | 113474508 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0893942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC CCTTTGAAGA AAATAATTCA TCGGAGCCTG AGTTTCCGGA TGACCCATTC
CCAAGTGTCC ACTATCTCCC TGGGGCTGAC TACTCTAACC CTGAGGTTAC AGACCCGATG
ATACAAGGTG CCTGGGGTGA GGTTCGTGAC GAGTTGGCTG ATTTTATCTT GGCCCCGGAG
TTCGATGACT ATATTAAAAC GGCTTTTGGT GAAACTGTGG ACCCGGAGCT GGCAAAGGAG
CAGATAAAGG ATGTTTTGAC TGGGGAAAAT TTGCCCGAGG TTATTATGTT GCCGGCGGCG
GATATGGAGC CGGCGGTGGG TGCCTATGAT CCTTTGACTG GTTCAATTTA TTTGGCTGAT
TCTTTATTGC CTGATACTGA TGGGGTTTTG GTGGATGTGC TGTTGGAGGA GTTGGGGCAT
TTTTTGGACT CTCAGTTGTC TGAGTCGGAC TCCCCTGGAG ATGAGGGTGA GTTATTGGCT
GCTTTGGTGA GGGGTGAGGA GTTGACTCAG TTTCAGGTGA TGATGCTTCG GGGTCAGGAT
GATCGGGTAG ATATTTGGGT CGGGGGTGTT GAGGTTGAGG TTGAGGCTAG TGAAAAGGTT
GATTTTGAGA AGGCTCGTAA TTTTAAGGTG GGAGACATAG CTAGGTCAGT AGCAGTAGGA
GATTTTAATG GAGATGGCAT TCCTGATCTG GCTGTGGCGA ACTTTTCTTC AGACAACGTA
TCAGTGTTAT CAGGAAAAGG TGACGGTAGT TTTGGTTCAG CTACTAATTT TCCGGTGGGA
GACGGACCTA TCTCAGTAGC AGTAGGAGAT TTTAATGGAG ATGGCATTCC TGATCTGGCT
GTGGCGAACC TCTGGTCAGA CAACGTATCA GTGTTATCAG GAAAAGGTGA CGGTAGTTTT
GGTTCAGCTA CTAATTTTCC GGTGGGAGAC GGACCTATCT CAGTAGCAGT AGGAGATTTT
AATGGAGATG GCATTCCTGA TCTGGCTGTG GCGAACGACG GGTCAGACAA CGTATCAGTG
TTATCAGGAA AAGGTGACGG TAGTTTTGGT TCAGCTACTA GTTTTCCGGT GGGAGACGGA
CCATTCTCAG TAGCAGTAGG AGATTTTAAT GGAGATGGCA TTCCTGATCT GGCTGTGGCG
AACAGGTTTG TGGCGAACCT CTGGTCAGAC AACGTATCAG TGTTATCAGG AAAAGGTGAC
GGTAGTTTTG GTTCAGCTAC TAGTTTTCCG GTGGGAAACG GACCTTGGTC AGTAGCAGCA
GAAGATTTAA ATGGAGACGG CATTCCTGAT CTGGCTGTGG CGAACTTTTC TTCAGACAAC
GTATCAGTGT TATCAGGAAA AGGTGACGGT AGTTTTGGTT CAGCTACTAA TTTTCCGGTG
GGAGACCGAC CTTGGTCAGT AGCAGCAGAA GATTTAAATG GAGATGGCAT TCCTGATCTG
GCTGTGGCGA ACATCGGTTC AGACAACGTA TCAGTGTTAT CAGGAAAAGG TGACGGTAGT
TTTGGTTCAG CTACTAATTT TCCGGTGGGA GACGGACCTA TATCAGTAGC AGCAGAAGAT
TTAAATGGAG ACGGCATTCC TGATCTGGCT GTGGCGAACT TCAATTCACA CAACGTATCC
ATCCTCATCA ACAAAACCCC CATAACCATC ATCCCCAACA TCACCATCTC CGACACCAAG
CTCACCGAAG GCAACACAAA TAAAACCGCC AAATTCACGG TCACCCTAGA CAACCCCACA
ACCACCACAG TCAAAGTCAA CTACACCACA GCCAACCAAA CCGCAAAAGT CAACCAAGAC
TACAAACTCA CCAAAGGTAC CCTGACCTTC CAACCAGGAG AAACGAACAA AAACATCACA
GTTCCCATCT TGGGAGATAA CCGAGACGAA CCCCAGGAAA AATTCCGAGT CGCTCTGAGC
AGCCCCCAAA ATGCCAACAT CAAAGATGGG GAAGCTACAG GTACCATCGT TGATAACGAC
CCAGTTCCCC AAATATCCAT CGGCGATGCC AAAGTTACCG AAGGAAACCG AGGTCAGAAA
AACATAGAAT TTGAAGTCAA ATTAAACAAC CCCAGCGGGA AAACAGTGAG AGTAAATTAT
GGAACCCAAG AGGGCAGCGC CAAGTCAGGA AAAGATTTTC GAAATAAAAG GGGAGTCCTG
ACATTCCAAC CAGGGCAGAC CAAAAAAATA GTGAACATTC CCATTTTGGG AGATCGGGTT
GATGAAAATA ACGAGGAGTT TCAAGTCAAA CTCAGCCGTG CCAGAAATGG AAAATTGTCA
GATAAAACAG CAGTCGGCAG AATTATTGAT AACGACGAAA CATTACCCCA AATATCCATC
AGGGATGCCA AAGTCACGGA AGGAAACAGG GGTAAGAAAC AGATGAAGTT TGAAGTCGAG
CTCAACAACC CGAGCACGAA AACAGTGAGG GTAAATTACG CCACAGTAGA TGGCAGCGCC
AAGTCAGGAA AAGATTTTCA AAATAAAAGG GGAGTGGTGA CATTCCAACC AGGGCAGAGG
AAAAAGATAG TGAATATTCC CATTGTGGGA GATCGGGTTG ATGAAAATAA CGAGCAGTTT
CAAGTCAAAC TCAGCCGTGC CAGAAATGGT AAGTTGTCAG ATAAAACAGC CGTCGGCAGA
ATTATTGATA ACGACGAAAC CCAAATATCC ATCAGGGATG CCAAAATTAC TGAAGGACAA
CAGGGAGAGA AAAACATGAA GTTTGAGGTC AAGTTAGATA ATAGTAGCAG TGAAGTAGTG
AAAGTTAATT ATGAGACCGT TGACGGTAGC GCGAAGTCAG GAAAAGATTA TCTGAAGAAA
AAGGGAGTCC TGAAATTCCA ACCAGGGGAG ACCAAAAAGA CAGTAAATGT TAGTATTTTG
GGAGATACTG TTGATGAAAA GGATGAGAAA TTTCAAGTGA AACTCAGCGG CGCTAAAAAT
GGTAAGTTAT CAGATGCCAA AGCAGTCGGT ATTATTCAAA ACAACTCAGC GCCAGAGGAT
ATTAAAAACC CTGTAGATCT AGGAATTCTG TCTTCAGAAC AAACTTCCAG GGTTGATGAT
ATTGGGTTTG CAACTGGACC GGTCGACCGT AATACAGAAG ATTATTTCTC TTTTGAGGTA
GAAAAAGAAG GTTTAGTCAG TGTTTTTGTA GATAGTTTTG TGCAGGATCT GGGAATTAAA
TTGTATGATA AAGATGGGAG TCTACTTAAC CAGTCAAATA AGGAGGGTTT TGCAACAGAG
AAAATTCAAG TTATTCTAGA TCCTGGTGTT TATTATTTGA AAGTTTTCCC AGTCGGAAGC
GGTCGGACTG ATTATAATTT GAGTATTAAT ATTATTAATT AG
|
|---|
| Protein sequence | MTEPFEENNS SEPEFPDDPF PSVHYLPGAD YSNPEVTDPM IQGAWGEVRD ELADFILAPE
FDDYIKTAFG ETVDPELAKE QIKDVLTGEN LPEVIMLPAA DMEPAVGAYD PLTGSIYLAD
SLLPDTDGVL VDVLLEELGH FLDSQLSESD SPGDEGELLA ALVRGEELTQ FQVMMLRGQD
DRVDIWVGGV EVEVEASEKV DFEKARNFKV GDIARSVAVG DFNGDGIPDL AVANFSSDNV
SVLSGKGDGS FGSATNFPVG DGPISVAVGD FNGDGIPDLA VANLWSDNVS VLSGKGDGSF
GSATNFPVGD GPISVAVGDF NGDGIPDLAV ANDGSDNVSV LSGKGDGSFG SATSFPVGDG
PFSVAVGDFN GDGIPDLAVA NRFVANLWSD NVSVLSGKGD GSFGSATSFP VGNGPWSVAA
EDLNGDGIPD LAVANFSSDN VSVLSGKGDG SFGSATNFPV GDRPWSVAAE DLNGDGIPDL
AVANIGSDNV SVLSGKGDGS FGSATNFPVG DGPISVAAED LNGDGIPDLA VANFNSHNVS
ILINKTPITI IPNITISDTK LTEGNTNKTA KFTVTLDNPT TTTVKVNYTT ANQTAKVNQD
YKLTKGTLTF QPGETNKNIT VPILGDNRDE PQEKFRVALS SPQNANIKDG EATGTIVDND
PVPQISIGDA KVTEGNRGQK NIEFEVKLNN PSGKTVRVNY GTQEGSAKSG KDFRNKRGVL
TFQPGQTKKI VNIPILGDRV DENNEEFQVK LSRARNGKLS DKTAVGRIID NDETLPQISI
RDAKVTEGNR GKKQMKFEVE LNNPSTKTVR VNYATVDGSA KSGKDFQNKR GVVTFQPGQR
KKIVNIPIVG DRVDENNEQF QVKLSRARNG KLSDKTAVGR IIDNDETQIS IRDAKITEGQ
QGEKNMKFEV KLDNSSSEVV KVNYETVDGS AKSGKDYLKK KGVLKFQPGE TKKTVNVSIL
GDTVDEKDEK FQVKLSGAKN GKLSDAKAVG IIQNNSAPED IKNPVDLGIL SSEQTSRVDD
IGFATGPVDR NTEDYFSFEV EKEGLVSVFV DSFVQDLGIK LYDKDGSLLN QSNKEGFATE
KIQVILDPGV YYLKVFPVGS GRTDYNLSIN IIN
|
|---|
| |