Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0651 |
Symbol | |
ID | 4243158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1063223 |
End bp | 1063879 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638105950 |
Product | translation factor SUA5 |
Protein accession | YP_720563 |
Protein GI | 113474502 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.585338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTT TTTACGAACT TCATCCTGAT ACTCCCCAAA ATAGACGTGT AGAAAAAATT ATCAATGATC TTAAAGATGG GGCAGTAATG CTTTATCCCA CAGATACTGT TTACGCAATA GGTTGTGACC TCTATGTTAA ATCTGCTGTA GAAAAAGTTA GACAAATTAA GCAATTGTCT AATGATAAGC CTCTGACATT CCTCTGTTCC TCTTTGTCCA ACATTGCCAA TTATGCTGTG GTGAATGACT CAGCCTACCG GATTATTAAA CGTCTAATTC CTGGCCCTTA CACATTTGTG CTGCCTGCAA CCAAGTTAGT CCCACGTCTG GTTATGAGTC CAAAACGTAA AACAACCGGT ATTCGGGTTC CTAATAATCA AGTTTGCTTG ACCTTATTAA AGGCCTTAGA CAATCCTATT ATTTCCACAT CAGCTAACAT TACCAGTGAT GCAGAAGGAA TAGCTCCAAT AAAGGTAGAA GTAGTCACGG GTAAAGCAGA GTTGTTTGAT TGTCTAGAAA ATCTTGTGGA TATAATTGTA GATGATGGTT CTGACTCAAT ATATCAAGTA TCAACTATCC TTGACTTAAC TGGCCATCAG CCAAATCTGA TTCGTCAAGG TCTTGGAGTT GAGGCTGTAA TATCTCTGAT TAGTTAA
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Protein sequence | MATFYELHPD TPQNRRVEKI INDLKDGAVM LYPTDTVYAI GCDLYVKSAV EKVRQIKQLS NDKPLTFLCS SLSNIANYAV VNDSAYRIIK RLIPGPYTFV LPATKLVPRL VMSPKRKTTG IRVPNNQVCL TLLKALDNPI ISTSANITSD AEGIAPIKVE VVTGKAELFD CLENLVDIIV DDGSDSIYQV STILDLTGHQ PNLIRQGLGV EAVISLIS
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