Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0639 |
Symbol | |
ID | 4242777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 1041863 |
End bp | 1042810 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638105940 |
Product | WD repeat-containing protein |
Protein accession | YP_720553 |
Protein GI | 113474492 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.221679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0018351 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAGTTTCA TCTACACCCT GAAAACCTGG ATTTTAGAAA AATGCTTTCC CGTCATTGCA CTCACGGGTA TCAGTGGTAT CGGTAAAACT ACATTAGCGG TAAAACTCAT TCAACAAATA AAAGATAATT TTGACTATGT AATTTGGCGC AGCCTCAAAA AAACCTCCAA TTTTGCCGAA TTTCAAGCTG ACTTAATTGA GTTTTTCTCC CAGTCTCAAC CACAAAATTT TCTCAAAAAC AGACATAAAC CTTTAGACTT AATCAAATAT TTACAGAAGC ATCACTGTTT AGTTGTCTTG GATAACATTC ATAACCTATT CAGCAGTGGG GAGTTAGCTG GAAAGTACAA ACCAGGATAC GAAGAATATG ACTACTTTTT CCAACAGATA GAAAAACTAT CTCATCAAAG TTGCCTGTTA TTAATAGGTT GGGAACCCAT TAAACTGCTC CAACTCAAAA GCAAGAAAAC TATCATTCCT ATTTTGCAAC TGACTGGTTT AGATATCAAA AGCGCCAAAG AAATACTCAT AAATTATGGT TTGGCAAAAA TTGAACATTC AGAAAAACTC ATTCATCTCT ATCAAGGCAA CCCTCTATGG TTAAAAATTG TAGCGACTCA AATTCAAGAA TTGGAAGAAA GTTTGATTGA GTTATTGCCC AGTGATATCA TCTTATTGCC AGAATATTTG AAAGATAACT TACAACAGCA ATGCGATCGC CTTTCCCAAG CAGAAAAATA CACTCTGTCA CTTTTAGCCA CAAAAAATCA ACCTATTAGT TTGGCGAAAC TTTTAGAAAC TACAGAAACG TCGCCATCAG CTTTACTCAA CATATTACAA TCTTTGTGTC GTCGTTCCCT GATCGAAAAA CAAGAAAATC TCTACAGTCT GCCATCTATA CTAAAAGAAT ATTATACAGA GAATAAATTC ACGCTTAATA TAGTATGA
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Protein sequence | MSFIYTLKTW ILEKCFPVIA LTGISGIGKT TLAVKLIQQI KDNFDYVIWR SLKKTSNFAE FQADLIEFFS QSQPQNFLKN RHKPLDLIKY LQKHHCLVVL DNIHNLFSSG ELAGKYKPGY EEYDYFFQQI EKLSHQSCLL LIGWEPIKLL QLKSKKTIIP ILQLTGLDIK SAKEILINYG LAKIEHSEKL IHLYQGNPLW LKIVATQIQE LEESLIELLP SDIILLPEYL KDNLQQQCDR LSQAEKYTLS LLATKNQPIS LAKLLETTET SPSALLNILQ SLCRRSLIEK QENLYSLPSI LKEYYTENKF TLNIV
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