Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0591 |
Symbol | |
ID | 4242748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 949911 |
End bp | 952352 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638105895 |
Product | FG-GAP |
Protein accession | YP_720508 |
Protein GI | 113474447 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.41506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAATT TATCCAAAAA TTGTTCGGTC GGTGAGGCTT CCTGCCTAGC TCCACCACCT CAAACTTTAG TGGCGATCGA CTCCCGAGTT GATAACTCTC AAATATTACT TACAGGAGTT AAACCCGGAG TTAAAGCTGT AATTATAGAT AGGGAGGAAG ATGCTATTCC TCAAATTACT CTAGCTTTAT CGAAATATCC CGCCCGTAAT TTACAAATTG TTTGTCACGG CGAACCGGGT ATTTTATATT TAGGCAAAAC CCCTATTACT GCCCCTACTA TGGAAGGATA TTCCCATTTG TTAGCAGAGT GGGATGTAGA GGATATTTTA TTATATGCTT GTCAAGTGGC GGGTCTCTCC AACAATACCG TTAATTCTTT ATTAGCTCGA CTGCATCAAT TAACAGGAGC AAATATTGCT GCCTCAACCC ACCGGGTAGG AAGTCAACAG TTAGATGGCA GTTGGGAGTT AGATACTTTT ATCGGTCAGG TTAATTCTGA GTTAGCTTTG TTACCAGAAG TGGTGGAAAG TTATCCGGGG GTATTAGCGA CATTTGGTGA ACCTACTACT TATCCTACAG GTGGACTTGA ACCTATCTAC TTAAAAACAG GAGACTTGAA CAACGACAAC ATTCCTGATG TTGTGACTGG CAATGGTGAG TCAGATAATG TCTCTATATT TTTAGGTAAA GGTAATGGTA CTTTTGAAGT AGCTACCCGC ATTCCAGCAG GAGATGGACC TACTGGCGTC AATATCGGTG ACTTCAATAA AGATGGCTTT AATGATATTG TTGTTAGTAA CTTTGATGAA GATACTGTAT CAGTCTTTTT AGCTGATGGT ATGGGTAGTT TTTTAACTCC TCAAACCTTT GCCGGAATAG GCGCTCCTAC TGAAATTCAA GTAGCAGACT TTAATAAAGA TGGAAATCAA GATATAGTAG TTACAACCCA GTCTAGAGGA AATAGCATCA TTACGCTGCT AGGAAATGGG AATGGTGACT TTAATCAATT AACAACTCAG GCGACAGGTG CTTGGTTGTC AGCTAAAGGG GATTTTAATC AGGATTCGAT CCTAGACCTT GCCACTGTTC AAGCCATTGG TGGCGGTTTG ACTTCTTATG TTTCCATCTA TTTAGGCAAC GGTATTGGCG GTTTTTCTAC TCCTGCTCAA TATAATACAG GTGGAAATTC TGGTGATGTG GAAGTAGGTA ATTTTAATAA CGATCGCTTC ATTGACTTGG TTACCACTAA CGAGGAGTCA GACAATATTT CTATCCTATT AGGTAATGGA AATGGTACCT TTGAGAACCC TCTCTTACTT GATGCCAGCG ATGCGCCAGA TGGTGTGGCT GTAGCTGATC TAAATAAAGA TGGTTTTGAT GATATTGCGG TAGCTCACAA TAGCTCAAAT AATGTTTTAG TGTTTTTAGG AAAAGGGAAA GCTAAATTTG CTTCACCTAT TGATCTTCCT ACAGGAGGCG CTGACGCCAG AATTTTAAAG TTATCCGACC TTGATAGTGA CAATGACTTG GATATTGTGG TGCCCAATAG AGACTCTTCC AATATCTCAG TGATACTAAA TACATCCCTC ATCGGTAACA ACAAAAATAA CACCCTCAAA GGAAATAACA AAGCCAACTT CATCAACGGT GTTGGTGGTA AAGATAACTT AAAAGGCAGT GGTGGTAACG ATACCATATT AGGAGGAGGC GGAAACGATC GCCTAGATGG CAACAGTGGC AATGACACCC TTACTGGTGA AGCAGGGAAC GATAGCCTCA ACGGTGGCAG CGGTAACGAC AAACTCAACG GTGGTGGAGG CAATGACATA CTCAACGGTG GTAGCGGAAG AGATAGACTT GATGGTAGTG GAGGCAACGA TATACTTAAT GGTGGCAGCA GCAATGACAA ACTCAACGGT GGTGGAGGCA ATGACAAACT CAATGGTGGC AGCGGAAGGG ATAGACTGAT CGGCAATAAT GGCAAGGACA TCCTAACCGG CGGCAGTGGT AACGATACCA TATTAGGAGG CGGTGGAGAC GATGAATTAA TTGGGGGTAG TGGCAACGAC CTACTAAATG GTGGATCCGG TGACGACAAA TTTATCTATA GTAGTCGCAA AGCTTTTAAC AGAAAAACCT TCGGCAAAGA CAGAATAGCT AACTTTGCCC CAGGATCCGA TAAAATTATC TTAGATAAAA CAACATTCAC AAGCTTAGAT AGCACAGCCG GTGAAAGCTT CAGCAATGAC AGCGAATTTG AGATAGTCAC CAACAACTCT GCAGCATCCA GCAGTAGCGC CGAAATTGTT TACGTTTCAT CTACCGGCAA CTTGTATTAC AACCCCAACG GTAGCGACGC CGGTTTTGGT GGTGGCGGGC AGTTTGCTAA GTTGCTCGGC AGACCCGCTC TAACAGATAG CGACTTTTTA ATTGAAAATT AG
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Protein sequence | MLNLSKNCSV GEASCLAPPP QTLVAIDSRV DNSQILLTGV KPGVKAVIID REEDAIPQIT LALSKYPARN LQIVCHGEPG ILYLGKTPIT APTMEGYSHL LAEWDVEDIL LYACQVAGLS NNTVNSLLAR LHQLTGANIA ASTHRVGSQQ LDGSWELDTF IGQVNSELAL LPEVVESYPG VLATFGEPTT YPTGGLEPIY LKTGDLNNDN IPDVVTGNGE SDNVSIFLGK GNGTFEVATR IPAGDGPTGV NIGDFNKDGF NDIVVSNFDE DTVSVFLADG MGSFLTPQTF AGIGAPTEIQ VADFNKDGNQ DIVVTTQSRG NSIITLLGNG NGDFNQLTTQ ATGAWLSAKG DFNQDSILDL ATVQAIGGGL TSYVSIYLGN GIGGFSTPAQ YNTGGNSGDV EVGNFNNDRF IDLVTTNEES DNISILLGNG NGTFENPLLL DASDAPDGVA VADLNKDGFD DIAVAHNSSN NVLVFLGKGK AKFASPIDLP TGGADARILK LSDLDSDNDL DIVVPNRDSS NISVILNTSL IGNNKNNTLK GNNKANFING VGGKDNLKGS GGNDTILGGG GNDRLDGNSG NDTLTGEAGN DSLNGGSGND KLNGGGGNDI LNGGSGRDRL DGSGGNDILN GGSSNDKLNG GGGNDKLNGG SGRDRLIGNN GKDILTGGSG NDTILGGGGD DELIGGSGND LLNGGSGDDK FIYSSRKAFN RKTFGKDRIA NFAPGSDKII LDKTTFTSLD STAGESFSND SEFEIVTNNS AASSSSAEIV YVSSTGNLYY NPNGSDAGFG GGGQFAKLLG RPALTDSDFL IEN
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