Gene Tery_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0588 
Symbol 
ID4242745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp944659 
End bp945549 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content39% 
IMG OID638105892 
Productdihydrodipicolinate synthase 
Protein accessionYP_720505 
Protein GI113474444 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.144122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAAACT TTGGTAGTGT TCTGACTGCA ATGATTACAC CGTTTAATCT AGACGGTAGT 
GTTAACTATG AAGAAACAGA AAAGTTATCA ATATGGTTGA CAGAAAATGG AACAGACTCA
TTAGTGGTAT GTGGAACAAC AGGTGAGTCT CCGAGTCTGA CATGGGAAGA AGAATATGAG
TTATTTCAAG TAGTTCAAAA AGCAGTGGGA GGAAAAGCTA AAGTTATAGC AGGTACTGGG
TCAAATTCAA CAAAAGAGGC GATCACAGCT ACTGAAAAAG CAGCTAAATT GGGTTTAGGA
GGTTCATTAC AGGTGGTACC ATATTACAAT AAACCACCAC AGTCAGGACT TTATCGGCAT
TTTCAAGCGA TCGCTCAAGC CACGCCAGAT TTCCCAATCA TAATATATAA TATACCAGGG
CGTACAGGTA AAAACATGGA GCCAGAAACT GTAGCTAGAC TGGCGGAAAT TCCAAATATT
GTCGCTATTA AAGAAGCAAG TGGCAACTTA GACCAAGTAA GTCAGATTAG AAACTTGACG
GCACCAGAGT TTAAGATTTA TTCTGGAGAT GACTACCTAA CTCTACCATT AATGGCTATA
GGTGGCAATG GGGTTGTTAG TGTAGCTAGT CACCTGGTAG GAAATAAACT ACAGGAGATG
ATAGTAGCGT TTAAAACAGG TGAAGTACAG CGTGCGACAA AAATTCATTT AGAACTATTC
AATTTATCTA GAACTCTATT TGCCACAACT AATCCCATTC CTATAAAGGA AGCTATGAAT
ATGTTGGGAT GGAATGTAGG TAAGACTCGC CTTCCATTAT GCGATCCACC AGCAGAGATT
ACTGAAAAAT TAAGGGTAGA AATGGATAAA TTAGGTCTAT TAGCCAGATA G
 
Protein sequence
MVNFGSVLTA MITPFNLDGS VNYEETEKLS IWLTENGTDS LVVCGTTGES PSLTWEEEYE 
LFQVVQKAVG GKAKVIAGTG SNSTKEAITA TEKAAKLGLG GSLQVVPYYN KPPQSGLYRH
FQAIAQATPD FPIIIYNIPG RTGKNMEPET VARLAEIPNI VAIKEASGNL DQVSQIRNLT
APEFKIYSGD DYLTLPLMAI GGNGVVSVAS HLVGNKLQEM IVAFKTGEVQ RATKIHLELF
NLSRTLFATT NPIPIKEAMN MLGWNVGKTR LPLCDPPAEI TEKLRVEMDK LGLLAR