| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0584 |
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| Symbol | clpX |
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| ID | 4244610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 936923 |
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| End bp | 938272 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638105888 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_720501 |
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| Protein GI | 113474440 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAAT ACGACTCCCA TCTAAAATGT TCATTCTGTG GCAAGTCTCA AGAGCAGGTT
AGGAAATTGA TAGCTGGACC TGGAGTTTAT ATATGTGATG AATGTGTAGA GTTGTGCAAT
GAGATTTTGG ATGAGGAGCT TTTTGACTCC AATGCTACAG GAGCACAACC ACCAATACCA
CGTCCAGCAC CAGCACCCCA AAAACGAGGG ACTGGTACTA AGAGATTATC TATTAGTCAA
ATACCTAAGC CTAGGGAAAT AAAGAATTAT CTGGATGCTC ATGTTATTGG TCAGGAGGAA
GGTAAGAAGG TTTTATCAGT GGCAGTTTAT AACCACTATA AACGTCTGAG TTTTCTAGAG
GCCAAAAAAA GTGGTAAGTC CTCTCAAGAT GAGGTGGAAT TACAAAAGTC TAATATTTTG
TTGATTGGGC CCACAGGTTG TGGAAAAACG TTGTTGGCTC AAACTTTGGC GGATTTATTG
GATGTGCCTT TTGCCGTGGC AGATGCGACG ACTTTAACTG AAGCTGGATA TGTTGGGGAG
GACGTGGAGA ATATTTTGCT ACGACTTTTA CAAGTAGCAG ATTTAGAAGT GGATGAAGCA
CAACGGGGAA TTATATATAT TGATGAGATT GATAAAATAG CTCGTAAGAG TGAGAACCCT
TCTATAACAA GAGATGTTTC TGGGGAGGGT GTGCAGCAAG CCTTATTAAA GATGTTGGAG
GGAACTGTTG CTAATGTTCC TCCACAAGGT GGTCGGAAAC ATCCCTATCA AGATTGTATT
CAGATCGATA CGAGTAATAT TTTATTTATC TGTGGTGGTG CTTTTGTTGG TTTAGAAAAG
ATAGTAGATC AAAGAATTGG TAAAAAGTCA ATGGGCTTTA TTCACCAGAG TGGGGACAGT
TATCAGGTTA AGGAGAAAAA AGTTGTAGAT TTAATGAAGC AAATGGAACC AAATGATTTG
GTGAAGTTTG GTTTGATCCC AGAATTGATT GGGCGAATAC CTATGGTGGC TGTCGTTGAA
CCTCTCGATG AGGAGACTCT GATGGCAATT TTGACGAAAC CTCAGAATGC TCTGGTGAAG
CAGTATCAAA AGCTGTTACG GATGGATAAT GTGAAGTTGG AGTTTGAGGA GGATGCTGTA
CGGGCGATCG CGAAGGAAGC ATTTAGGAGA AAGACTGGGG CGCGAGCTTT GCGGGGTATT
GTTGAGGAGT TGATGTTGGA TGTGATGTAT GAGCTACCAT CACGGAAGGA TGTGAGTCGT
TGCACTATTA CTAAGGAAAT GGTGGAAAAG CGATCAACTG CAGAGTTGTT ATTGCATCCT
TCGTCTTTGC CTAAACCGGA GTCAGCTTAA
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| Protein sequence | MSKYDSHLKC SFCGKSQEQV RKLIAGPGVY ICDECVELCN EILDEELFDS NATGAQPPIP
RPAPAPQKRG TGTKRLSISQ IPKPREIKNY LDAHVIGQEE GKKVLSVAVY NHYKRLSFLE
AKKSGKSSQD EVELQKSNIL LIGPTGCGKT LLAQTLADLL DVPFAVADAT TLTEAGYVGE
DVENILLRLL QVADLEVDEA QRGIIYIDEI DKIARKSENP SITRDVSGEG VQQALLKMLE
GTVANVPPQG GRKHPYQDCI QIDTSNILFI CGGAFVGLEK IVDQRIGKKS MGFIHQSGDS
YQVKEKKVVD LMKQMEPNDL VKFGLIPELI GRIPMVAVVE PLDEETLMAI LTKPQNALVK
QYQKLLRMDN VKLEFEEDAV RAIAKEAFRR KTGARALRGI VEELMLDVMY ELPSRKDVSR
CTITKEMVEK RSTAELLLHP SSLPKPESA
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