Gene Tery_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0576 
Symbol 
ID4244602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp926399 
End bp927370 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content36% 
IMG OID638105881 
ProductRieske (2Fe-2S) region 
Protein accessionYP_720494 
Protein GI113474433 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCAA ATTTGCCTAA TAGCTGGTTT CGTGTTGCTA GAAGTGAAGA TTTATCTACC 
AAAGGAGTTA TACCACTTCA TTATTTTGGA AAAGACTTTG TACTGTTTCG TACAGAAGAT
GGCAAACCCC ATATTTTTGA TGCCCATTGT CCTCACTTAG GGGCTCATCT TGCTCATGGG
GGTAGAATAG AAGGCCAGAC TCTAAGATGT CCCTACCACG GTTGGTTTTG GGATACAAAT
GGACAATGTG CTGCGACTCC TTATCCGAAT AAAGCAAAAC CTCAAGTCAA AATACAAAAT
TGGCCTGTAC TTGAGCTGAA TGGTCTAATA ATGATGTATC ATCACCACCA AGGAAAATTA
CCAGACTGGG AAATACCGCA AATACCAGAA CTAATGTCTG AGGAATGGAC TCCTCTACGT
TTAGTCCGTC AGTGGAAAGT ACGCACTACT CTTCAAGATT ATATGGACAA TAGTGTAGAT
GTCTCTCACT TATATAATTT GCACAGCCGT ACTTTTAAAA GCGCTCATAG TTATGGTGTA
GAAATTGACG GACCAATGTT AACTCATAGA ATGTCCCAGA AATATAATTT ATCTTCTTTA
GCAGCGGGAA AATTAGTATT GGAAGATGGC TCAGTTACTA CTATTTATTA TGGACCTGCT
TATGATGTGA GTTTTTACTG GACAGAAGGA AAGTTAAAGC TAGGTTTGCT AACTATTTTT
ACAGGAACAC CAATAAATAA TGAGTATCTT GATATTGCTA TATTTTATAG TGTGAAAAAA
GTTCTACCTT TTCCTTTAAG CTTGATTTTA AATAAGATGT TAAAACAGGA TGTTTTAGAA
ACTTTTGAAC AAGATGTGAG TATTTTAGAG AATAAAAAAA ATATTCGTAA TCCACTTTTA
TATCAAAATG ATGGCCCTGT GCGTCAGTCT CGAAGTTGGG CAAGTCAATT CTACTCCGAA
AATTCTGCTT GA
 
Protein sequence
MYSNLPNSWF RVARSEDLST KGVIPLHYFG KDFVLFRTED GKPHIFDAHC PHLGAHLAHG 
GRIEGQTLRC PYHGWFWDTN GQCAATPYPN KAKPQVKIQN WPVLELNGLI MMYHHHQGKL
PDWEIPQIPE LMSEEWTPLR LVRQWKVRTT LQDYMDNSVD VSHLYNLHSR TFKSAHSYGV
EIDGPMLTHR MSQKYNLSSL AAGKLVLEDG SVTTIYYGPA YDVSFYWTEG KLKLGLLTIF
TGTPINNEYL DIAIFYSVKK VLPFPLSLIL NKMLKQDVLE TFEQDVSILE NKKNIRNPLL
YQNDGPVRQS RSWASQFYSE NSA