Gene Tery_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0562 
Symbol 
ID4242952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp881101 
End bp882081 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content38% 
IMG OID638105870 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_720483 
Protein GI113474422 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.6978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TAGTTTTAGA AAAACCGGGA ATTCCTGATA GTTTATATAT TACAGAAATA 
CCTTTACCAC AACCGGCAGC AGGGGAAATA CGGGTACAAG TTCATGCTGT CGGACTAAAC
CCTGTTGACT ACAAACTTGC TGCTGGGGGT TTTTCAACAT GGAGTTATCC ATTTATTTTG
GGGTTAGATG TGGCAGGGGT TGTGGATGCT GTCGGTACTG ATGTGACTGA ATGGCAGGTT
GGAGAGCAGG TTTATTATCA TGGAAATTTA TCTAAACCAG GAGCTTATGC AGAATATACT
AATGCTAACG CTTTAGCAGT TGCTCCACTT CCAGAGGGTA TTTCTTTTAC AAAAGCTGCT
GCTATTCCTT GTGCTGGTTT CACTGCTTAC CATGCTTTGC ATCACCGTTT GCATATTCAA
TCAAAACAAA CTATTTTAAT TCATGGTGGT GCTGGTGGAG TTGGTAGTTT TGCCCTCCAG
TTAGCATCTT TGGCAGGTTT GGAGGTGATT ACAACTTGTT CTCAGAGTAA TTTTGATTAT
GTGCAAAAGT TGGGAGCAAA GCATTTAATT GATTATAAAA ATCAGGATGT AGTTATAAGA
GTCAAGGAAA TTACTAACGA CCGTGGTGTT GATGCTATTT TAGATACGGT TGGTTCGGAA
ACTGCAACAA CAGGTTTGAA AATGTTGGCA TTTAATGGTG GAATTGCTTG TATTGCTGCT
TTGCCTGATT TTAGTAATTT CAAATCTTTT AGTCTTGCTG CTTCTATCCA TCAAATTGCT
TTAGGAGGTG CTTATTTATC TGGGGATAAA AAAGCGATTC AAGATTTAGG AAAAATGGGG
AGAGAAATGG GAGAATTAGT AAGAGAAAAG AAAGTTAGTC CGATGTTAAC TGAAGTAATT
AGTTTGGAGG AAATACCGAA AGCATTAAAT CGTTTGAAAG GTCGTCATGT AAGAGGAAAA
ATAGTTGCTG AAATTCGATA A
 
Protein sequence
MKALVLEKPG IPDSLYITEI PLPQPAAGEI RVQVHAVGLN PVDYKLAAGG FSTWSYPFIL 
GLDVAGVVDA VGTDVTEWQV GEQVYYHGNL SKPGAYAEYT NANALAVAPL PEGISFTKAA
AIPCAGFTAY HALHHRLHIQ SKQTILIHGG AGGVGSFALQ LASLAGLEVI TTCSQSNFDY
VQKLGAKHLI DYKNQDVVIR VKEITNDRGV DAILDTVGSE TATTGLKMLA FNGGIACIAA
LPDFSNFKSF SLAASIHQIA LGGAYLSGDK KAIQDLGKMG REMGELVREK KVSPMLTEVI
SLEEIPKALN RLKGRHVRGK IVAEIR