| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0557 |
|---|
| Symbol | |
|---|
| ID | 4242947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 875083 |
|---|
| End bp | 875631 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 638105865 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720478 |
|---|
| Protein GI | 113474417 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.898255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGTTC AGTATAGATT TATTCAGCTT GCCAGACAAG GAAATTCTAA AGCGATCGCT
ACCCTATTAA ATAATAAATT ACATTCTAAA GGTATTAATG CAAAAGTTAG TGTAGTTAAT
AATTGCTTAT ACATACTCCT AGAATCTGAT GAACTGCCAG AGAGAAGTAT AATTATATAT
ATAGTCAGAA ATCAACTACT AGAAGTAAAA CTGGATGCAA TTAAAATAGT CAAATTATCG
TTCAAAAGAT ACATTGATAA GTATCCTACC TGGGGTCAAA CATTAGATTT AAAGTTAAAC
TCTTTATCTA GTTTAAAATT AGCTAGTTCT TCTGATAATA AACAAAGTGT ATTTTCTCAA
AAAAATAAAA TTAATCCCAT CAAAAATCAA CGTTTAAATA ATCTCAGAAT AAGTATCCTA
ACTTTAGGGA TAGTTATGAT AATATTATTT ATATCTTTAG TTGTTTTTAT TGGGAAAAAT
TTAGTAAAGC AATCATCACA AACTCCTAAC AGGGGTACAA CTTATCCAGA AGTATTACCA
ACAGAATAA
|
|---|
| Protein sequence | MMVQYRFIQL ARQGNSKAIA TLLNNKLHSK GINAKVSVVN NCLYILLESD ELPERSIIIY
IVRNQLLEVK LDAIKIVKLS FKRYIDKYPT WGQTLDLKLN SLSSLKLASS SDNKQSVFSQ
KNKINPIKNQ RLNNLRISIL TLGIVMIILF ISLVVFIGKN LVKQSSQTPN RGTTYPEVLP
TE
|
|---|
| |