Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0535 |
Symbol | |
ID | 4244503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 847091 |
End bp | 847798 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638105846 |
Product | 6-phosphogluconolactonase |
Protein accession | YP_720460 |
Protein GI | 113474399 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.797573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0500199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAC AAGTTAAGTT ACTAGAAGAT AAAGAACAGT TGATCAAACA AGCTTTGGAC ATTTGCTTGG CGAAAATTCA AGAGGCGATC AGAGAACGTA ATCAATGTAC AATAGCTTTA GCTGGTGGAA ATACTCCAAG GCCACTTTAT GAGTTCATAA AAAATCAAAA TATAGATTGG GATAAAATTC ATGTATTTTG GGGCGACGAA CGTTATGTAG CTCCTGACCA TCCGGATAGT AATCAAAAAA TGGCCAGAGA AGCTTGGCTA GATCAAGTAA CCATACCAGC AACAAATGTT CATCCTATGG AAACAGGGTC GGGAGACCCG GAAGCTGATG CTTTAAAGCA TGATGCTCAT TTGCGAGATT TTTTTCAAGT CTCTACAGGG GAGTTTCCGA GCTTTGATTT GATTTTACTA GGAATGGGAG GTGATGGTCA TACAGCCTCC TTGTTTCCCC ATACAAACGC TTTGAAAGTA AGCGATCGCC TAATTACTGT AGGAAATAAA GATGGCCAAC CGCGATTAAC TTTCACGGTT CCATTAATCA ATCAAGCACG TTGCGTAATC TTTCTAGTTG CTGGTGCAGA CAAACAAGCC GCGTTAGACG AAGTATTTGC AGAAAAAGGT GATGATATGA ATTATCCCAG TCGCCTGATC CAACCTAAAG GAGAGCTACA ATGGTTATTA ACGGGTGTTA ATATTTGA
|
Protein sequence | MEKQVKLLED KEQLIKQALD ICLAKIQEAI RERNQCTIAL AGGNTPRPLY EFIKNQNIDW DKIHVFWGDE RYVAPDHPDS NQKMAREAWL DQVTIPATNV HPMETGSGDP EADALKHDAH LRDFFQVSTG EFPSFDLILL GMGGDGHTAS LFPHTNALKV SDRLITVGNK DGQPRLTFTV PLINQARCVI FLVAGADKQA ALDEVFAEKG DDMNYPSRLI QPKGELQWLL TGVNI
|
| |