Gene Tery_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0535 
Symbol 
ID4244503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp847091 
End bp847798 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content40% 
IMG OID638105846 
Product6-phosphogluconolactonase 
Protein accessionYP_720460 
Protein GI113474399 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.797573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0500199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC AAGTTAAGTT ACTAGAAGAT AAAGAACAGT TGATCAAACA AGCTTTGGAC 
ATTTGCTTGG CGAAAATTCA AGAGGCGATC AGAGAACGTA ATCAATGTAC AATAGCTTTA
GCTGGTGGAA ATACTCCAAG GCCACTTTAT GAGTTCATAA AAAATCAAAA TATAGATTGG
GATAAAATTC ATGTATTTTG GGGCGACGAA CGTTATGTAG CTCCTGACCA TCCGGATAGT
AATCAAAAAA TGGCCAGAGA AGCTTGGCTA GATCAAGTAA CCATACCAGC AACAAATGTT
CATCCTATGG AAACAGGGTC GGGAGACCCG GAAGCTGATG CTTTAAAGCA TGATGCTCAT
TTGCGAGATT TTTTTCAAGT CTCTACAGGG GAGTTTCCGA GCTTTGATTT GATTTTACTA
GGAATGGGAG GTGATGGTCA TACAGCCTCC TTGTTTCCCC ATACAAACGC TTTGAAAGTA
AGCGATCGCC TAATTACTGT AGGAAATAAA GATGGCCAAC CGCGATTAAC TTTCACGGTT
CCATTAATCA ATCAAGCACG TTGCGTAATC TTTCTAGTTG CTGGTGCAGA CAAACAAGCC
GCGTTAGACG AAGTATTTGC AGAAAAAGGT GATGATATGA ATTATCCCAG TCGCCTGATC
CAACCTAAAG GAGAGCTACA ATGGTTATTA ACGGGTGTTA ATATTTGA
 
Protein sequence
MEKQVKLLED KEQLIKQALD ICLAKIQEAI RERNQCTIAL AGGNTPRPLY EFIKNQNIDW 
DKIHVFWGDE RYVAPDHPDS NQKMAREAWL DQVTIPATNV HPMETGSGDP EADALKHDAH
LRDFFQVSTG EFPSFDLILL GMGGDGHTAS LFPHTNALKV SDRLITVGNK DGQPRLTFTV
PLINQARCVI FLVAGADKQA ALDEVFAEKG DDMNYPSRLI QPKGELQWLL TGVNI