| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0531 |
|---|
| Symbol | |
|---|
| ID | 4242379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 840599 |
|---|
| End bp | 841864 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638105842 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_720456 |
|---|
| Protein GI | 113474395 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.247848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAC CAATTGGTAT TGATTTATTT GCAGGCGCAG GAGGTATGAC TCTTGGATTT
GAACAAGCAG GATTTGATAT ACCTATTTCC GTAGAATTAG ACCCTATTCA CTGTGCTATT
CATAAGTTTA ATTTTCCCTT TTGGTCCATA TTATGTCGTA ATGTTGTCGA ACTCACAGGG
AATGAAATTA GAGAGAAATT AAATATTCCA AATAGAGAAA TTGATGTAAT TTTTGGAGGT
CCTCCATGTC AAGGATTTTC TCAGATTGGA AAACGTGCTT TAGACGATCC TCGAAATGCG
CTTATATCTC ATTTTTTACG AATAGTTTTG GAATTAAAAC CCAAATATTT TGTCATAGAA
AATGTTAAAG GTTTAACTGT AGGAAAACAT CAAATTTTTC TTGAGGAAGT TATTAATAAA
TTATCTAAAA ATAGTTATCA ACTACAACTG CCTTACCAAG TTTTAAATGC TGCTAATTAT
GGTGTACCAC AACACCGAGA AAGATTATTT ATACTAGGAT GTAAAAAAGG TTTAAAATTA
CCAAATTATC CACAAATTCA AATACATAAA AAATCAGAAG CCTATATAAA TGTCTGGGAT
GCAATAGGAG ATTTACCAGA AGTAGAAAAT TATCCAGAAT TATTAGAAAT AGACTGGGTA
AAAGCAGAAA ATGACTATGA TAAACCAAGT GAATATGCTA AAAAACTCCG TGGAATTGAA
TATTTTAACA ATGATTATTC TTATGAACGT GAATACGACC AGACAATATT AACCTCTAGT
TTACGCACAA AACATACACA ACAATCAATA GCAAGATTTG ATGCTACAGC ACAAGGAAAA
ACTGAGCCAG TAAGTCGCTT TTATAAACTG AATCCTCACG GTATTTGTAA CACACTCAGA
GCAGGGACTC CAAGTAGTAG AGGTTCATAT ACTTCTCCTA GACCAATACA TCCATTGACA
CCCAGATGTA TCACAGTTAG AGAAGCAGCA AGACTACATT CATATCCTGA TTGGTTTAGA
TTTCATGTGA CAAAATGGCA TGGTTTTAGA CAAGTAGGTA ATTCAGTTCC ACCACTATTA
GCAAAAGCAG TTGCTCAAGA AATTATTCAT GCTTTAAATA TTCAACCATT TAAACCTACA
AAGACAGAAT ATGAGTTAGA AAATCTCAAA AATTTAGAGC TTAATATGTC TAGAGCCGCC
GATTTATATG GTATTGATAG ATATACTATT GCACCCAGAC TAAGAAAGTT AAAATTAAAT
AATTAA
|
|---|
| Protein sequence | MQRPIGIDLF AGAGGMTLGF EQAGFDIPIS VELDPIHCAI HKFNFPFWSI LCRNVVELTG
NEIREKLNIP NREIDVIFGG PPCQGFSQIG KRALDDPRNA LISHFLRIVL ELKPKYFVIE
NVKGLTVGKH QIFLEEVINK LSKNSYQLQL PYQVLNAANY GVPQHRERLF ILGCKKGLKL
PNYPQIQIHK KSEAYINVWD AIGDLPEVEN YPELLEIDWV KAENDYDKPS EYAKKLRGIE
YFNNDYSYER EYDQTILTSS LRTKHTQQSI ARFDATAQGK TEPVSRFYKL NPHGICNTLR
AGTPSSRGSY TSPRPIHPLT PRCITVREAA RLHSYPDWFR FHVTKWHGFR QVGNSVPPLL
AKAVAQEIIH ALNIQPFKPT KTEYELENLK NLELNMSRAA DLYGIDRYTI APRLRKLKLN
N
|
|---|
| |