| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0524 |
|---|
| Symbol | |
|---|
| ID | 4242372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 829610 |
|---|
| End bp | 830479 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638105835 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720449 |
|---|
| Protein GI | 113474388 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.82026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.832729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAAA CCAAAAACAC CCTTTTGTCT CATACTGATT TAGTAAAATC CTATTTGGAC
ATTGAAGTAC TAGGGCAAGT TATGACAAAA AATTCTGACT CACAAGATGA GTATCTAGCT
AAAATTAGGA ATGTTTGTAA TGGGAGTGCT GAAGATTTAG AACTATATGA GGCGATCGCT
AACTTTTGTC GGCAAACCAA TGATAGAAAG CGCCGTCTAG CATTTGTTCC TTTATTTAAG
AAAATTGAAA AATTAAGAGG ACTAAAAAAA GTTAGCAATT CTAGCGAGTA TTATCATGAC
TACCAAGATA TATTGCAGGA GACTTGGGAA GAGTTTTACA AAAAGTTTCC CGCTGAGTTT
GAACCTGCAG GCCAATCTTT AAAAGGAAGT TTGGTAACTT GGATTAACGA AAAACTGCGT
TTGAGATACA AGGTAATAGA CTTATATCCC AAGTCTAGAG ATGACAATAA AGGAAATAAA
CCCTTAACCC CAAAACAGAG ATTTAACCAA ATAATCAGAA GTAAACCAAA ATCTCTGGAT
GCTCCTAATA GTACCAATGA TTTTGATAAT GATTTGACCA TTGGCGATTT CTTAGAGAGT
GAGGACCCTG GACCTCTGGA GGAGGCTATT GGGGAAGAGC AAAAACAAAA CATTAATATG
TTCTTGGAAA TAGTCAAGGA TAGTAAATAT CATATGCGCA GCTGTCCCGA ATGTACTTTT
CAGGCTGTTG CTCAACGTCT TTTTTTTGAG GAACCTTCGA AAAATTTGAA GCAAGTTGCA
TTGGAGTTCG GAGTTAATTA TAGTAGTTTA CGGACTTTTT GGCTACGGAC TTGTAAGAAA
ATTTCTCAGG AACTATCCCC AGAACTATAA
|
|---|
| Protein sequence | MVKTKNTLLS HTDLVKSYLD IEVLGQVMTK NSDSQDEYLA KIRNVCNGSA EDLELYEAIA
NFCRQTNDRK RRLAFVPLFK KIEKLRGLKK VSNSSEYYHD YQDILQETWE EFYKKFPAEF
EPAGQSLKGS LVTWINEKLR LRYKVIDLYP KSRDDNKGNK PLTPKQRFNQ IIRSKPKSLD
APNSTNDFDN DLTIGDFLES EDPGPLEEAI GEEQKQNINM FLEIVKDSKY HMRSCPECTF
QAVAQRLFFE EPSKNLKQVA LEFGVNYSSL RTFWLRTCKK ISQELSPEL
|
|---|
| |