Gene Tery_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0508 
Symbol 
ID4242356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp810760 
End bp811599 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content32% 
IMG OID638105822 
Productpeptidase M48, Ste24p 
Protein accessionYP_720436 
Protein GI113474375 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC GCAATCCTTC ACCAACTAAT CGTCAACTTT TAATTATATT AGGAATTTGG 
ACGGGGATTA TTGTCATAAT GATTAGCTTA ATGATTAGCT TTGTATCCCT GTTAGCTGAT
TGGGCAATTA CTCATATTCC TATTAGTTGG GAACAAAAAT TAGGAGAATT AATAGTCCCG
GTTTATGAAC AAAAAGCTAA AGATTCTCCT CAACAAGAAA TCTTAAATAA TCTCTTAGAT
CGTTTAGAGT CTCAACTCAA TAATAAATTA CTAAAAAATA GAGATTATCG AGTTATCTAT
ATTCCCGAAA AAAATGTTAA CGCTTTTGCT ATTCCTGGGG ATGTTATTGG TATTTTTGAA
GGGCTAGTAA AAGAGGTTAA ATCAGAAAAT GAATTGATGA TGATTTTAGG TCATGAATTA
GGACATTTTG CTAATAGAGA TCATCTTCGG AATTTAGGGA AAACTTTAGC TATTCGAGTT
GCGATCGCTA GTCTTTTTGG AGATAATGCG ACTTTAGCTA ATAGTGTTGG AGTTGTTATT
GAAACTATTA GTAATGCTCG CTATTCTCAG GAACAAGAAT ATCAAGCAGA TGAATTCGGA
TTAATATTAT TAAATAAAAC CTATGGTCAT GTAACAGGGG CAACGGATTT TTTTAAGAAC
TTTAAAGAGA AAGAAAACCT AGGCTGGGAC TTTTTTTCTA GTCATCCTGC CGGAAACAAG
CGTGTCAAAA GACTAGAAAA ATTAATTAAA CAAAAACAAT ATAAATTAGG TGAATATTCT
GATTTAGAGT TAAATTTACA GTTTAGTGAT CAGGAGTTTC GGAAATATAA GCAGAGATAA
 
Protein sequence
MSNRNPSPTN RQLLIILGIW TGIIVIMISL MISFVSLLAD WAITHIPISW EQKLGELIVP 
VYEQKAKDSP QQEILNNLLD RLESQLNNKL LKNRDYRVIY IPEKNVNAFA IPGDVIGIFE
GLVKEVKSEN ELMMILGHEL GHFANRDHLR NLGKTLAIRV AIASLFGDNA TLANSVGVVI
ETISNARYSQ EQEYQADEFG LILLNKTYGH VTGATDFFKN FKEKENLGWD FFSSHPAGNK
RVKRLEKLIK QKQYKLGEYS DLELNLQFSD QEFRKYKQR