| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0495 |
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| Symbol | |
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| ID | 4242343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 793660 |
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| End bp | 795066 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638105810 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_720424 |
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| Protein GI | 113474363 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.228882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.128677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTGTT GCATGACTTT ATTTCAACTG ACCGAAATAT TAACTACTAC AACACTTACA
GGTTTTCATA CTCCAGAAAA AACATTAATT ACAAGCATAA ATACAGATAC TCGTAACTTA
CAGCCTGGTG AAGGATTTTT GGCATTACGA GGAAATAATT TTGATGGCCA TAATTTTGTT
GACGAAGCAA TCGAAAAGGG AGCTTCTTGT GTGATTGTTG AACAAGAATA TACCTTAAAT
AGTGAGATTC AACAACTATC AAATAATATA CCTATATTAC AAGTAGAAAA TACTTTAAAA
GCTTACCAAA AAATTGCTCG TTGGTGGCGA GATAGATTTG ATATTCCTGT TATTTCGGTC
ACAGGTTCAG TAGGTAAAAC AACTACTAAA GAATTAATTG CTGAAGTTTT AGCAACTCAG
GGTAAAGTCA TGAAAACTGA AGCTAATTAT AACAATGAAA TAGGTGTAGC TAAAACTCTA
CTACAACTTT CTAATGAAGA GAATTATGCA GTAGTAGAAA TGGCAATGCG GGGACCAGGA
GAAATAGCAG AGTTAACACA TATTGCTAAC CCGACAATTG GTTTAATTAC TAATGTCGGT
ACTGCTCATA TTGGTCGTTT GGGTTCTGTT GAAGCCATTG CTGAAGCTAA GTGTGAATTG
TTAAGAGAAA TGTCTGATAG TAGTATTGCT ATTCTGAATT ATGATAATCA ACGGTTGATA
GAAACTGCGG CTAAAGTTTG GTCTGGAGAA ACTTTTACTT ATGGTTTAGA AGGTGGAAAT
TTACAAGGAA AATTAATTGA TTCTCAAACG ATAAATGTTG AGGGTGTGGA TTTACCTTTA
CCTTTACCTG GTAGTCATAA TGCTTCTAAT TATTTGGCAG CATTAGCAGT CTTAAAAGTG
CTTCATGGAA AAAATATTCC CGCAAAAACT CTGTTTCAAT CTTTGACTAA TAACTTATTC
GTTCAATTAC CAGGAAGTAG GGCAAGAAAA TATGATTTAA AGAATGATAT TGTAATTTTA
GATGAAAGTT ATAATGCTGG ATTAGAGTCA ATGATAGCTG CTCTCAATTT GTTAGCTGAA
ACTCCTGGTA AACGACATAT TGCTGTATTG GGAACTATGA AAGAATTGGG AAACAAATCA
ATTTTATTTC ATCAACAAGT TGGTAATGTT GTCAAAAATT TGAATATTGA TGGTTTATTT
ATTTTAGCTG ATTTTGAGGA AGCAAAAGCA ATGGCTACAG GTGCTGCTAG TTTGCAATTT
ATCAAGGTAG AAAATATCAC TGCTGATAAT GCTCATCATA ATTTAGCCAA ATATTTACAG
GAGTTTTTAC AGCCTGGTGA TCGGGTTCTT TTTAAGGCTT CTCATTCTGT AGAGTTAAAT
AAAGTAGTCG AACTTTTAAT TAATTAG
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| Protein sequence | MVCCMTLFQL TEILTTTTLT GFHTPEKTLI TSINTDTRNL QPGEGFLALR GNNFDGHNFV
DEAIEKGASC VIVEQEYTLN SEIQQLSNNI PILQVENTLK AYQKIARWWR DRFDIPVISV
TGSVGKTTTK ELIAEVLATQ GKVMKTEANY NNEIGVAKTL LQLSNEENYA VVEMAMRGPG
EIAELTHIAN PTIGLITNVG TAHIGRLGSV EAIAEAKCEL LREMSDSSIA ILNYDNQRLI
ETAAKVWSGE TFTYGLEGGN LQGKLIDSQT INVEGVDLPL PLPGSHNASN YLAALAVLKV
LHGKNIPAKT LFQSLTNNLF VQLPGSRARK YDLKNDIVIL DESYNAGLES MIAALNLLAE
TPGKRHIAVL GTMKELGNKS ILFHQQVGNV VKNLNIDGLF ILADFEEAKA MATGAASLQF
IKVENITADN AHHNLAKYLQ EFLQPGDRVL FKASHSVELN KVVELLIN
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