| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0473 |
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| Symbol | rpsL |
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| ID | 4241685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 751967 |
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| End bp | 752341 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638105788 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_720402 |
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| Protein GI | 113474341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACAA TTCAACAACT GATTCGTTCA GCTCGTCAAG ATACAGAAAA GCAAACCAAA
TCTCCGGCAC TGAAAAGTTG CCCTCAACGT CGTGGAGTAT GCACAAGGGT GTATACAACG
ACACCAAAAA AACCCAACTC GGCTCTACGG AAAGTAGCTA GGGTCCGTCT AACTTCAGGC
TTTGAAGTGA CCGCTTATAT CCCTGGTATT GGTCATAATT TACAGGAACA CTCTGTAGTT
ATGATTAGGG GGGGTAGGGT TAAGGATTTA CCTGGAGTAA GATATCACAT AATTCGTGGC
ACATTAGATA CTGCAGGAGT AAAAGACCGC AAGCAAAGTC GATCTAAGTA TGGAGCTAAA
AAGCCCAAAG CTTAA
|
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| Protein sequence | MPTIQQLIRS ARQDTEKQTK SPALKSCPQR RGVCTRVYTT TPKKPNSALR KVARVRLTSG
FEVTAYIPGI GHNLQEHSVV MIRGGRVKDL PGVRYHIIRG TLDTAGVKDR KQSRSKYGAK
KPKA
|
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