Gene Tery_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0470 
Symbol 
ID4243764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp748560 
End bp749348 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content39% 
IMG OID638105785 
ProductRNA-directed DNA polymerase 
Protein accessionYP_720399 
Protein GI113474338 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG CTAAAACCCT AAAAAGAAGT TTAGAAAATC CTAAACCATT TTTAAGCGTG 
GCATGGGATA CAAACGATAT ACCAGATCCA TGTAGTGTTA ATCCTAATCT TAAATGGAAA
GACATTAACT GGAAAAAGGT AGAAAAGTAT GTGTTTAAGT TGCAAAAATT AATTTACAGA
GCATCCAGCC GTGGCGAAAT CCGCAAGATG CGTAAATACC AAAAACTTCT GACCAAAAGT
TACTACGCCT TGTTGCTAGC TGTTAGACGG GTGACTCAGG ATAACCAGGG TAAAAAAACT
GCGGGTATAG ATGGTATAAA GAATCTACCC CCAATGCAAA GATTAAACCT GGTAAATTTA
TTAAAAAGAC GCCGATTAAA AGCAAGCCCA ACCCGCAGAG TCTGGATACC AAAACCAGGG
AGGAATGAAA AACGCCCATT AGGCATACCT ACTATGTATG ATAGGGCGCT ACAAGCCTTG
GTTAAGTTGG GTAGGTCACC AGAGTGGGAG GCACACTTTG AATTTAACAG TTATAGCTTT
AGACCAGGGC GGTCAACACA TGATGCTATT GCAATCTATC TCAGCATTAA TAAGAAACCA
AAATATGTAT TAGATGCTGA CATATCCAAA TGTTTTGACC GAATTAATCA TGATGCTTTG
TTGAGAAAAA TGGGTCAAAC ACCTTACAGA CGATTAATCA AACAATGGTT AAAATCTGGA
GTGTTCGACA ACAAGCAATT CTCAAAAACT GTGGAAGGTA CACCACAAGG AGGGGTTATT
AGTCCTTAA
 
Protein sequence
MNKAKTLKRS LENPKPFLSV AWDTNDIPDP CSVNPNLKWK DINWKKVEKY VFKLQKLIYR 
ASSRGEIRKM RKYQKLLTKS YYALLLAVRR VTQDNQGKKT AGIDGIKNLP PMQRLNLVNL
LKRRRLKASP TRRVWIPKPG RNEKRPLGIP TMYDRALQAL VKLGRSPEWE AHFEFNSYSF
RPGRSTHDAI AIYLSINKKP KYVLDADISK CFDRINHDAL LRKMGQTPYR RLIKQWLKSG
VFDNKQFSKT VEGTPQGGVI SP