| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0469 |
|---|
| Symbol | |
|---|
| ID | 4243763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 747702 |
|---|
| End bp | 748271 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638105784 |
|---|
| Product | group II intron, maturase-specific |
|---|
| Protein accession | YP_720398 |
|---|
| Protein GI | 113474337 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.414556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGATTCT ATATTAGGCA ATATGAGGTT AAGACAGCCA ATAAAGGATT TAAAACAATC
ATAAAACCAT CATCCAAGAG TATAAAAACT CATTATCGGA AACTGGCGGA TATATGTGAT
AAATACAAAA ATGCCTCCAC AAAAGCTTTA ATAACTAAAC TTAATCCGGT AATAAAGGGA
TGGGCCAATT ACTTCTCTGC CATAGTTAGT AAAAGTACAT TCAGCAAGCT GGATATGCTT
TTGTGGAAAA GAATAGGTCA ATGGGCAATG AGGAGGCACC CAAACAAGTT AGCCAAATGG
GTAAAGAAAA AGTATTTCCC TCACTGCAAA ATAACCAGAA ACTGGATACT TAACGACGTG
GCCATAATAA GGCACGTTAA AGTGAAAGGC AATAAATCTC CTTATGACGG CGATTGGACT
TATTGGAGTA GTAGAATTGG AAAGCATCCA GGCATAAGGA AAGAAGTAAC AACGCTGTTA
AAACGGCAAA AGAATAAATG CGCATTCTGC GGATTAACCT TTAGGTCAAC CGACCAAATG
GGAAGTAGAT CATATAAAAA CAAGGTCTAA
|
|---|
| Protein sequence | MGFYIRQYEV KTANKGFKTI IKPSSKSIKT HYRKLADICD KYKNASTKAL ITKLNPVIKG
WANYFSAIVS KSTFSKLDML LWKRIGQWAM RRHPNKLAKW VKKKYFPHCK ITRNWILNDV
AIIRHVKVKG NKSPYDGDWT YWSSRIGKHP GIRKEVTTLL KRQKNKCAFC GLTFRSTDQM
GSRSYKNKV
|
|---|
| |