Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0466 |
Symbol | |
ID | 4243760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 739494 |
End bp | 744134 |
Gene Length | 4641 bp |
Protein Length | 1546 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638105782 |
Product | glutamate synthase (ferredoxin) |
Protein accession | YP_720396 |
Protein GI | 113474335 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.549913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAT CTCATACAAA TCTCAAAGCG GATCAAGGAA CTTATCAAGG CCAAAGATGG TTGGTAGAAG AACGGGATGC CTGTGGAGTA GGTTTTATTG CTCACCCATC AGGGAAAAAA AGCCATGAAA TTATATTGAA AGCTTTGCCT GCTTTAACTT GCTTAGAGCA TCGCGGTGGT TGCAGCGCAG ATAAAGATTC AGGGGATGGA GCGGGTCTAA TGACTCAAAT TCCTTGGGAG TTGCTGTCAG AAAACTTAGA GTTAAACCCT GATAACTGTG GTGTAGGAAT GATATTTTTG CCCCAAACGG AAAAAAAGGC GGCAATAGTA CGTCAGATAA TTGAAAAAAA AATCAGGAAC GAAGGTCTAG AGGTCGTGGG TTGGCGAGTT GTACCAGTTG TACCAGAAAG ATTAGGAGTA CAAGCTAAAA TAAATCAACC ACAGATAGAA CAAATTGTTG TCAGTTCAGA TAAGTTGCAA GGGGATGAGT TGGAGCGATC GCTTTATTTA ATCCGTCGTA ATATTGGACG TGTGATAGAA GAAGAAGGTT TGAGCTGGGG AATAGATACT TATATTTGTT CATTTTCTTG TCGCACTATT GTATACAAAG GTATGGTGCG CTCTGCGGTT CTGGGAGAAT TTTACACAGA CCTGAAAAAT CCAGCTTATA AAAGTTCGTT TGCGGTTTAT CATCGACGCT TTAGTACGAA TACGATGCCC CGATGGCCTC TTGCCCAACC TATGCGCTTA CTCGGTCACA ATGGAGAAAT TAACACTCTA TTGGGAAACA TTAACTGGAT GAGAGCACGG GAGGCAAGTC TGAGTTCTTC TTTATGGGAG TCACGACTAG ATGAGTTGAA ACCTTTTGTT GATAATCAAA ATAGTGATTC GGCAAATCTA GATAATGTGA TGGAATTAAT GGTGCGTTCA GGAGGTAGTC CACTAGAAGC GTTGATGATC ATGGTGCCAG AAGCATATAA AAATCAGCCA GATTTGATAG ACTATCCAGA AATTACTGAT TTTTACGAAT ATTATAGCGG TTTGCAGGAA GGCTGGGATG GTCCGGCACT GTTAGCGTTT AGTGATGGTA AACAAGTGGG GGCAGCTCTA GACCGGAATG GTCTGCGACC AGCACGTTAT TGCATTACTA ATAATGATCT AGTTATTGTA GCATCGGAAG CAGGAGTAGT TGAGATACCA GAAAAAGAAA TACTTGAAAA AGGTCGCCTC GGTCCTGGAC AAATGATTGC TGTAGATTTA AGGACTAATG AAATTCTCAA AAATTGGGAG ATTAAAAAAC GCATCAGTGG ACAACAACCC TATAGAGAAT GGTTAAAAAA CAGAAAGCAG ATCATAAAGC AACCATTTAT AGCAAATTCT CAACTAGAAT CACAAAGTTT ACTGCAACTA CAAACAGCAT TTGGTTATAG TTTAGAAGAT CTGGATCTAA TCATTACTGA TATGGCAAAT TTAGGGAAAG AACCAACATT TTGTATGGGT GATGATATTC CCTTAGCAGT GCTTTCGGGA CGTCCTCATT TGCTATATGA CTATTTTAAA CAAAGGTTTG CTCAAGTGAC AAATCCTCCT ATTGATCCGT TGAGGGAGGG AATGGTTATG TCGCTGAATA TGTTGCTGGG TAAGCGTGGT AATTTATTAG AGGTTAGTGG GGAAAATGCA CGGTTATTAA AGGTGGAATC ACCTGTATTA AATGAGTCAG AATTAAAAGC AATTCGGGAT TCAGAATTTG CTACAGAAAC TATTTCTACT ATATTTGCTG TAGCTGATGG GCCAGAAGGT TTGAACAGGG CAGTGAAGAG TTTGTGCGAT CGCGCAGTAA AAGCGGTTGA GAATGGTAAG GAAATTCTGA TTTTATCTGA CAAATGTGAC GGGGGAATAA ATGCAGATTT TACTTATATT CCACCTCTGT TAGCTGTAGG TGCGGTTCAC CATCACTTGA TTCAAGAACG GTTGCGGATG AAAGCATCTT TGGTGGTGGA AACAGGTCAG TGTTGGAGTA CTCATCACTT TGCTTGTTTA ATTGGTTATG GAGCTAGTGC GGTTTATCCT TATTTAGCAT TAGAGTCTGT GCGTGCTTGG TGGTCTAGTT CCAAGGTGCA AAACCAAATG GAACGGGGTA AAATTACAAA AATTACTATT GAGGAAGCTC AGAAAAATTA TCGCCAAGCA GTGGAAGCAG GGTTATTAAA AATTCTGTCG AAAATGGGAA TTTCTTTGTT GTCTTCTTAT CAGGGGGCAC AGATTTTTGA GGCTATTGGT ATTGGTGGAG ATTTATTAGA GTTAGCTTTC CGAGGAACTA CTTCTAGGAT AAGTGGTTTA ACTGTGCCAG AGTTGGCACA AGAGGTGATT TCTTTCCACG GTCGGGGGTT CTTAGAACTG AATATTAAAA AGCTGGAAAA TTATGGGTTT GTGCAATATC GCCCTACTGG GGAATATCAC ATGAATAGTC CGGCAATGGC AAAAGAGCTT CATAAGGCAG TTACTGCGAT TAATGGTAGT AATGGTAATG GTAAAAATAT AGATCTAACG GAGTATGATC ACTATGAAGT TTACCGGAAA TATTTGCAAG AGCGACCAAT AACGGCTTTG CGGGATTTGT TAGATTTTCA TAGCTCTTCG CCTTCTATAC CTCTTGAGGA AGTGGAACCG GCAGCAGAAA TAATGAAGCG TTTTTGTACT GGTGGAATGT CCTTGGGATC GTTGTCACGG GAGGCACATG AAACTTTGGC GATCGCAATG AACCGAATAG GGGGTAAGTC TAATTCTGGG GAAGGTGGAG AAGATCCTAC AAGATTTAAA ATCTTAAATG ATGTTGATAA TCAAGGTTTG TCTCAGTTAT TCCCTCATCT CAAGGGACTG CGAAATGATG ATACTGCTTC TTCTGCTATT AAACAGGTTG CTTCTGGTCG GTTTGGTGTG ACTCCAGAAT ATCTGATGAG TGCTAAACAG ATTGAAATTA AAATTGCTCA GGGGGCAAAG CCGGGTGAAG GTGGTCATTT ACCTGGTAAA AAGGTGAGTG CTTATATTGC TAAACTACGT GGTTCTAAAC CTGGGGTTTC TTTGATTTCG CCTCCTCCTC ACCATGATAT TTATTCTATT GAGGATTTGG CACAGTTAAT TTTTGATCTC CACCAAATTA ATCCTAATGC TGGTGTTTCT GTGAAGTTAG TTGCAGAAAT TGGTATCGGT ACTATTGCGG CTGGTGTAGC TAAAGCTAAC GCTGATATTA TTCAGATATC TGGTCATGAT GGGGGTACTG GTGCTTCTCC TCTGAGTTCA ATTAAGCATG CTGGTGGTCC TTGGGAATTA GGTTTGACTG AGGTACATCG GGTATTGATG GAAAATCAAC TGCGCGATCG CGTTCTTCTT CGGGTAGATG GTGGCCTAAA AACTGGTTGG GATATAGTTA TGGCTGCTTT GATGGGTGCT GAAGAGTTTG GTTTTGGTTC TATTGCTATG ATTGCTGAAG GCTGTATTAT GGCTAGAATT TGTCATCTTA ATACTTGCCC AGTTGGTGTG GCAACTCAGC AGGAGAAGTT GCGTAATAAG TTTACTGGGG TGCCTGAAAA TGTAGTCAAT TTCTTCTGGT TTATTGCTGA GGAAGTACGA ACTATTTTGG CTAGGTTGGG TTATCGTTCC CTCAATGAAA TTTTAGGCCG TGCTGATTTG CTGAAAGCAC GGGAAAATGT GAAGTTAGTT AAGACAGAAA GTTTGAATTT AAGTTGTTTG CTTAAGTTGC CAGATACTCG TAATAACCGT GGTTGGTTAA ACCATGATAC TGTTCATAGC AATGGTCCGG TTTTAGATGA TGTGCTATTG GATGATGAGA AAATTCAAGG TGCAATTTGC AACCAGGGTA TTGTTTATAA GACGGGAATA AAGGTGGTTA ATACTGACCG TACTGTGGGA GCAAGGTTGG CAGGAGCGAT CGCTTCTCGT TATGGGAATA CTGGTTTTGA AGGGTTGATT AATCTCACGT TTAATGGTAG TGCTGGTCAG AGTTTTGGTG CGTTTAATTT GCCAGGAATG ACGTTAGTAT TGGAAGGTGA GGCTAATGAT TATGTTGGTA AGGGAATGCA TGGTGGAGAG ATTATTATTA AACCACCTGC AGAGGGACGT TATAACTCAG AGGAAAATGT GATTGTTGGT AATACCTGTT TATATGGTGC GACTGGTGGT ATTCTCTTGG CTAATGGTCA AGCTGGGGAA CGTTTTGCTG TTCGTAATTC TATGGCTAAG GCTGTTATTG AAGGTGTTGG AGATCATGCC TGTGAGTATA TGACTGGTGG TGTTATTGTT TGCTTGGGTA AGGCGGGCCG TAATGTTGGT GCTGGTATGA CTGGGGGAAT TGCTTATTTC TTTGATGAGG ATGGTGATTT TCCGGCTAGG GTGAATAATG AAATTGTTTC TATTCAGCGG GTGTCTACAT CAGCAGGTGA GGCGCAGTTG AAAGAGTTGA TTTCATTACA TTTTGGAAAG ACTGGTAGTC CAAAGGCAAA GATGATCTGG GCTAATTGGT CTGAGTGTTT GCCGAAGTTT TATCAAGTTG TACCTCCTTC TGAAGCTGAT ACGGCTGTAG CAAAGGTTGA GACTGGAAGT CAGGCTGTTG TTAAGGTATA G
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Protein sequence | MNQSHTNLKA DQGTYQGQRW LVEERDACGV GFIAHPSGKK SHEIILKALP ALTCLEHRGG CSADKDSGDG AGLMTQIPWE LLSENLELNP DNCGVGMIFL PQTEKKAAIV RQIIEKKIRN EGLEVVGWRV VPVVPERLGV QAKINQPQIE QIVVSSDKLQ GDELERSLYL IRRNIGRVIE EEGLSWGIDT YICSFSCRTI VYKGMVRSAV LGEFYTDLKN PAYKSSFAVY HRRFSTNTMP RWPLAQPMRL LGHNGEINTL LGNINWMRAR EASLSSSLWE SRLDELKPFV DNQNSDSANL DNVMELMVRS GGSPLEALMI MVPEAYKNQP DLIDYPEITD FYEYYSGLQE GWDGPALLAF SDGKQVGAAL DRNGLRPARY CITNNDLVIV ASEAGVVEIP EKEILEKGRL GPGQMIAVDL RTNEILKNWE IKKRISGQQP YREWLKNRKQ IIKQPFIANS QLESQSLLQL QTAFGYSLED LDLIITDMAN LGKEPTFCMG DDIPLAVLSG RPHLLYDYFK QRFAQVTNPP IDPLREGMVM SLNMLLGKRG NLLEVSGENA RLLKVESPVL NESELKAIRD SEFATETIST IFAVADGPEG LNRAVKSLCD RAVKAVENGK EILILSDKCD GGINADFTYI PPLLAVGAVH HHLIQERLRM KASLVVETGQ CWSTHHFACL IGYGASAVYP YLALESVRAW WSSSKVQNQM ERGKITKITI EEAQKNYRQA VEAGLLKILS KMGISLLSSY QGAQIFEAIG IGGDLLELAF RGTTSRISGL TVPELAQEVI SFHGRGFLEL NIKKLENYGF VQYRPTGEYH MNSPAMAKEL HKAVTAINGS NGNGKNIDLT EYDHYEVYRK YLQERPITAL RDLLDFHSSS PSIPLEEVEP AAEIMKRFCT GGMSLGSLSR EAHETLAIAM NRIGGKSNSG EGGEDPTRFK ILNDVDNQGL SQLFPHLKGL RNDDTASSAI KQVASGRFGV TPEYLMSAKQ IEIKIAQGAK PGEGGHLPGK KVSAYIAKLR GSKPGVSLIS PPPHHDIYSI EDLAQLIFDL HQINPNAGVS VKLVAEIGIG TIAAGVAKAN ADIIQISGHD GGTGASPLSS IKHAGGPWEL GLTEVHRVLM ENQLRDRVLL RVDGGLKTGW DIVMAALMGA EEFGFGSIAM IAEGCIMARI CHLNTCPVGV ATQQEKLRNK FTGVPENVVN FFWFIAEEVR TILARLGYRS LNEILGRADL LKARENVKLV KTESLNLSCL LKLPDTRNNR GWLNHDTVHS NGPVLDDVLL DDEKIQGAIC NQGIVYKTGI KVVNTDRTVG ARLAGAIASR YGNTGFEGLI NLTFNGSAGQ SFGAFNLPGM TLVLEGEAND YVGKGMHGGE IIIKPPAEGR YNSEENVIVG NTCLYGATGG ILLANGQAGE RFAVRNSMAK AVIEGVGDHA CEYMTGGVIV CLGKAGRNVG AGMTGGIAYF FDEDGDFPAR VNNEIVSIQR VSTSAGEAQL KELISLHFGK TGSPKAKMIW ANWSECLPKF YQVVPPSEAD TAVAKVETGS QAVVKV
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