Gene Tery_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0457 
Symbol 
ID4243751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp724335 
End bp725195 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content33% 
IMG OID638105774 
Productzinc finger, SWIM-type 
Protein accessionYP_720388 
Protein GI113474327 
COG category[S] Function unknown 
COG ID[COG4279] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.717379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATT ACACAAGCTT ACACAGTGAT AAAGAATGGT GGACTCAGCA ATGGATAGAT 
TTGTTAAATT CTTATCGGTA TAAAAAACGA TTAGAACGAG CTAGAAATTA TGCTCGGCAA
GGCAATGTTC TCAGCTTAGA ATTTAAGGAT CAAAAAATTA TTGCTGAAGT TCAAGGTACA
GCACCTGAAC CCTACAAGTT ATTTTTATGG TTAGATACTT TTACTGATGA AGACTGGAGT
TATATTATTC AAACTATGTC AGAAAGAGCA ATTTTTACTG CTAAATTATT GGCTGGAGAA
ATGCCTCAAG ATATAGAAGA AGTTTTTGCT GCTAATGGTT TAAGATTATT TCCTTTTACA
TTAGATGAAA TTCATTCTAA ATGTAGCTGC CCAGACCCAG CTAAAGTTTG TAAACATATT
GGAGCAGTTT ATTATTTATT AGGCGATCGC TTCAGTGATG ACCCATTTTT ATTGTTTCAA
TTAAGGGGTC GTACTAAAGA AAGAATTTTA GAAGAATTAC GTCAAAAACG TGGTCAAAGT
GAAGATGAAA AAGTTCCAGA AGCGAAAAAT TTTAAGTCTA AAAAAACCAA GGTTTCGGAT
TCCTTAACTG TGGCTTCAGC TACTCAAGAA TCTCTAAGTT TTGAGAATTT TTGGCAATAT
AATCAACAGT TAGATCCTTC CTTAGTAGTG ATTAGTCCAT CCCCTAGTAA TGAAATAGTT
TTAGATGTTT TGGGGGATGT TCCTTTCGGT TCATCTGCTA ATGTTGTTAT GAATTATTTC
CAGAAAATTT ATCAGAATAT TAGTCAACAG GCGGTAATGA CAGCGTTAAA CCAGGGAGAA
GATAAAAAAA GAGGTTTTTA A
 
Protein sequence
MTNYTSLHSD KEWWTQQWID LLNSYRYKKR LERARNYARQ GNVLSLEFKD QKIIAEVQGT 
APEPYKLFLW LDTFTDEDWS YIIQTMSERA IFTAKLLAGE MPQDIEEVFA ANGLRLFPFT
LDEIHSKCSC PDPAKVCKHI GAVYYLLGDR FSDDPFLLFQ LRGRTKERIL EELRQKRGQS
EDEKVPEAKN FKSKKTKVSD SLTVASATQE SLSFENFWQY NQQLDPSLVV ISPSPSNEIV
LDVLGDVPFG SSANVVMNYF QKIYQNISQQ AVMTALNQGE DKKRGF