Gene Tery_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0455 
Symbol 
ID4243749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp721508 
End bp723409 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content39% 
IMG OID638105773 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_720387 
Protein GI113474326 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA TTGTTGGTTA TGTTGGTACA CAGTTAGCTA CAGAAATTTT ACTATCAGGA 
TTAGAAAAAC TAGAATATCG GGGTTATGAT TCTGCTGGTG TGGCCACTAT TTGTAATGGT
CAAGTTAAAT CTGTTCGTGC TAAAGGTAAG CTATACAACC TACGGGAAAA ATTGGCAGGA
GTGGAAATGT TAGCTAATGT TGGCATTGGT CATACTCGTT GGGCAACTCA TGGTAAACCG
GAAGAATATA ATGCTCACCC CCATACGGAT GATACGGAGC GAGTCGCAGT AGTAGAAAAT
GGAATTGTAG AAAATTATCG GGAGTTACGC AAAGAATTGG AAAGTCAGGG GCATAAGTTT
GTTTCTGAGA CGGATACGGA AGTTATTCCT CATTTAATTG CAGAATTTTT ATCTAATTTT
GCGGGAAACG AGAAAGGGAG AACGAAGAAC AGGGAAAATT TTTTAGAGGC AGTGCGTCAG
ACTGTGAATA AGTTGGATGG GGCATTTGCG ATCGCTGTTG TTTGTGCAGA CTATCCGAAT
GAAATTATTG TTGCTAGACA GCAAGCACCT ATATCTATCG GTTTAGGTCA AGGGGAGTTT
TTTTGTGCTT CTGATACTCC TGCTCTTATA TCTCATACTC AAGTTGTTGT CAGTTTGGAC
AATGGAGAAA TGGCACGGTT AACTCCTCTG GGAGTCGAAG TTTATAATTT TGATGGCGAT
CGTATCAATA AACTACCTCG TATTCTTAAT TGGAGTCCAA ATTTAGTTGA CAAAAACATT
TTTAAGCATT TTATGCTTAA GGAAATACAT GAGCAACCAA ATGTTATTAG GAATTGTTTA
GAAACTTATA TTAATAGTGA TTGGGATGTG AAAAATATTC AGATTTCTCC TACTAATTTA
AACTTGTCGT CATCTTTATA TAAAAATTTG GAACAGGTGG AAATTTTTGC CTGTGGTACT
AGTTGGCATG CGAGTTTGAT TGGTAAGTAT TTATTAGAAC AATTAGCAGG AATTTCGACT
ACGGTAAATT ATGCTTCTGA AGCTCGTTAT GCTCCTTCTC CTCTGAGAGC AAATACTCTA
ACAATTGGTG TTACTCAGTC TGGTGAGACG GCTGATACTT TGGCAGCTTT AGCAATAGAA
CAACAGCGTC GTTTAGATAA ACCTGTTGAA TTCACGTCAA GATTATTAGG AATTACTAAC
CGGGTAGAAA GTTCTATTGC TAGTTTAGTG CATCAAATTA TTGATATTCG GGCAGGTGTT
GAAATTGGGG TTGCTGCAAC TAAAACATTT GTGGCACAGG TAATAGCTTT TTATTTTTTA
GCTATAGATT TAGGATGGCA ACGAAAATAT TTATCTGGGG AAAAAATCGC AGAAATTATT
AATGGTTTAC AAAAAATTCC GGCACAGATG GAACAGATTT TAGATTCTCA AAATAGTCAA
ATTGAAGATT TTGCTCACCA GTTTAATAAC ACTCAAGATT TGATTTTTAT AGGTAGGGGA
ATTAATTATC CAATTGCTTT AGAGGGTGCT TTGAAATTGA AGGAAATTAG TTATATTCAT
GCGGAGGGAT ATCCAGCGGG TGAGATGAAA CATGGTCCGA TCGCTTTGTT GGATGATCAA
GTACCTGTGG TGGCGATCGC TATGCCTGGT TTGGTTTATG AAAAGGTGCT TTCTAATGCT
CAGGAAGCTA AGGCGAGGGA TGCGCAGTTA ATTGGGGTGA CTCCTGAAAG TACGGAGGTG
GATATGTTTG ATAATGTGTT GGCGGTGCCG GCAGTGGATG AGTTGTTGTC GCCGATGTTA
ACTGTTATTC CTTTGCAGTT GTTAGCTTAT CATATTGCTG CTCATCGTGG TTTGGATGTG
GATCAGCCAC GGAATTTGGC GAAGTCGGTG ACAGTGGAGT AA
 
Protein sequence
MCGIVGYVGT QLATEILLSG LEKLEYRGYD SAGVATICNG QVKSVRAKGK LYNLREKLAG 
VEMLANVGIG HTRWATHGKP EEYNAHPHTD DTERVAVVEN GIVENYRELR KELESQGHKF
VSETDTEVIP HLIAEFLSNF AGNEKGRTKN RENFLEAVRQ TVNKLDGAFA IAVVCADYPN
EIIVARQQAP ISIGLGQGEF FCASDTPALI SHTQVVVSLD NGEMARLTPL GVEVYNFDGD
RINKLPRILN WSPNLVDKNI FKHFMLKEIH EQPNVIRNCL ETYINSDWDV KNIQISPTNL
NLSSSLYKNL EQVEIFACGT SWHASLIGKY LLEQLAGIST TVNYASEARY APSPLRANTL
TIGVTQSGET ADTLAALAIE QQRRLDKPVE FTSRLLGITN RVESSIASLV HQIIDIRAGV
EIGVAATKTF VAQVIAFYFL AIDLGWQRKY LSGEKIAEII NGLQKIPAQM EQILDSQNSQ
IEDFAHQFNN TQDLIFIGRG INYPIALEGA LKLKEISYIH AEGYPAGEMK HGPIALLDDQ
VPVVAIAMPG LVYEKVLSNA QEAKARDAQL IGVTPESTEV DMFDNVLAVP AVDELLSPML
TVIPLQLLAY HIAAHRGLDV DQPRNLAKSV TVE