Gene Tery_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0445 
Symbol 
ID4242223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp700843 
End bp702060 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content40% 
IMG OID638105763 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_720377 
Protein GI113474316 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTG ATAAATTTAC ATGGCTGCAT CGTGGTATTA GCGAAATATT CCCAGATCAA 
CCATATTCTC AAGACCCTAA TGAAAACTTA ATCCTGAAAT TAACCACATT AGACCGTCCT
TTGCGGGTTA AGTTAGGAAT TGACCCGACA GGAGTTGATG TCCATTTAGG CCATAGTATT
CCGGTGAGAA AACTCCGGGC ATTTCAAGAT GCTGGACATA CAGCAGTATT AATAATAGGA
GATTTTACCG CAAGAGTTGG TGATCCGACT GGAAAATCTG AAGCCCGACG CCAGTTGACT
CCAGAGCAGG TACAGGAAAA TGCCAAAACT TACTTAGATC AAGTCCGACC AATATTGGAT
TTTGATACCC CAGGACGGCT AGAAATTCGC TACAACTCAG AATGGCTATC TAAACTAGAT
TTGGCAGATA TTCTTGAGCT TCTGGCGACT ATGACTGTGG GGCAGATGTT GGCGAAGGAA
GGTTTTGCCC TTCGTTATCA ACAGGAAAAT CCTATATATA TCCATGAGTT TCTTTATCCT
CTGATGCAAG GTTATGATTC TGTAGCTGTG GATGCTGATG TGGAATTGGG TGGTACTGAC
CAAAAGTTTA ATATTGCGGT GGGGCGAGAT TTACAACGTC ATTTTGGTAA GAGGACTCAG
TTTGGTTTGT TAATGCCAAT TTTGTTGGGG ACTGATGGAG TCCAGAAAAT GTCTAAGTCT
CTGGGAAATT ATGTGGGTTT GTCGGAGGAC CCTTTGAGTA TGTATTCTAA GTTGGAGAAA
ATTCCTGATG ACCAGGTAGA AAACTATTTT GAATTATTGA CAAATTTAAA TATTAATGAT
ATAGATAAAA ATCCTCGTGA AAGACAAAAA TTGTTGGCTT TGGATATCGT GTCTCAGTAT
CACAGTCAGG AAGCTGCTTT GGAAGCTCAA CAAACTGCAG TGAAAATGGT AATTAAGGGG
GATATGAGTC AAACTGAGGC AGTACCAGAA TTTTCTTTGG CTTCTGTGGA GTTTCCAGCG
AAGTTGTTTT ATGTTGTTAG CGCTAGTGGT TTGTGTAAGA GTAGCTCTGA AGCTAGGAAA
AAAATTGCTG GGGGTGCTGT ACGTTTGGAT GATGAGCGTA TTTCAGATCA GAATTTTACT
TTAGATTCCC CAGCAGACCT TGATGGTAAG GTTTTACGGG TTGGTAAAAA GAATTTTGTT
CGCCTGGTAA AAAATTAA
 
Protein sequence
MMTDKFTWLH RGISEIFPDQ PYSQDPNENL ILKLTTLDRP LRVKLGIDPT GVDVHLGHSI 
PVRKLRAFQD AGHTAVLIIG DFTARVGDPT GKSEARRQLT PEQVQENAKT YLDQVRPILD
FDTPGRLEIR YNSEWLSKLD LADILELLAT MTVGQMLAKE GFALRYQQEN PIYIHEFLYP
LMQGYDSVAV DADVELGGTD QKFNIAVGRD LQRHFGKRTQ FGLLMPILLG TDGVQKMSKS
LGNYVGLSED PLSMYSKLEK IPDDQVENYF ELLTNLNIND IDKNPRERQK LLALDIVSQY
HSQEAALEAQ QTAVKMVIKG DMSQTEAVPE FSLASVEFPA KLFYVVSASG LCKSSSEARK
KIAGGAVRLD DERISDQNFT LDSPADLDGK VLRVGKKNFV RLVKN