Gene Tery_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0442 
Symbol 
ID4242220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp696402 
End bp696863 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content32% 
IMG OID638105760 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_720374 
Protein GI113474313 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.11179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTTG TTATCCAAAG AGTTAATTTT TCTCAGGTAA AAGTAAATGA AGAAATTGTT 
GGTAAAATTG GCAAAGGATT AAATTTGCTT GTCGCTATTT CCACAACTGA TACAGAAGCA
GAAATAGATT GGATAGTACG TAAATGTCTA GATCTGCGTT TATTTCCTGA CCCAGATAGT
AATAATAACT TTTGGGAAAA ATCTGTCAAA GATATAGATG GTGAATTGTT AATAGTTAGT
CAGTTTACTC TATATGGAGA TTGCCGTAAA GGTCGTCGCC CATCTTTCGA TAACTCTGCA
TCTCCTGAAG TTGCTAAACA ACTTTATCAA CTATTTGTAG AAAAATTAAA ATTGAGTGGT
TTAAAAGTAG CAACTGGTAT TTTTGGAGCA ATGATGCAAG TTGAAATTGA TAATGATGGT
CCCGTAACTT TCTTGTTAGA AAAAGAAGCT AATAATAAAT AA
 
Protein sequence
MRVVIQRVNF SQVKVNEEIV GKIGKGLNLL VAISTTDTEA EIDWIVRKCL DLRLFPDPDS 
NNNFWEKSVK DIDGELLIVS QFTLYGDCRK GRRPSFDNSA SPEVAKQLYQ LFVEKLKLSG
LKVATGIFGA MMQVEIDNDG PVTFLLEKEA NNK