| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0426 |
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| Symbol | |
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| ID | 4241931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 675849 |
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| End bp | 677618 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638105745 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_720359 |
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| Protein GI | 113474298 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.350523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00346836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAAAAGG CTAAAACACT AAAAAGAAGA ATGGACAAGC CAGAATCCTT TTTAAGCGTG
GCATGGGATA CAGACGATAT ACCGGATAAA ATTTGTGTTA ATCCTAATCT GAAATGGAGA
GACATAGATT GGAAAAAGGT TGAGAAGAAT GTATTTAAGT TGCAAAAGTT AATTTACAGA
GCATCCAGCC GTGGTGAGAT CCGCAAGATG CGCAAATATC AAAAACTTCT GATCAAAAGT
CATGACGCCT TGTTGCTAGC TGTTAGAAAT GTGACCCAGG ACAACCAGGG CAAGAAAACT
GCTGGGATAG ATGGGATCAA AAATCTACCT CCAATGCAGC GACTCCACTT GGTGGATTTG
TTAAAATCAC GTGACCTTAA AGCTAGCCCA ACTCAGAAGG TCTCAATACC AAAAACTGGT
AGAAACCAGA AGCGCCGGTT AGGCATTCAC TCGCTGTACG ACTTGGGACT GCAAACTTTA
GTTAAGTTGG GCATGGAACC AGAATGGGAG GCTCACTTTG AAACTAATAC CTATGGTTTT
AGGCCGGGTC GGTCAACAGA TGACGCTATT CAGGCGATTT ACCTCAGTAT CAACGACGAA
CCAAAATATG TACTGAATGC TGACATATCC AAATGTATGA GCGAAGTTAA CCATCATGCA
CTGCTAGGAA AAATAGATAA ATCTCCCTAT AGACAATTAG TCAAACAGTG GCTAAAGTCT
GGAGTATTTG ACAAGAGTCA ATTCGATCCA CCTCTCTTGG AGTTAGGTAC ACCACAAGGA
GAGGTAATTA GTCCCCTGCT AGCAAATATC GCTCTACACG GTATGGAAAA ATGCCTACAA
GACTTTGCTG AAACACTACC AGGAAATAAA AGGGATAATA TACAAGCATT ATCTTTAGTA
AGATATGCCG GTAACTTTGT AATATTACAC AAAGATATTG AGGTAGTAAT GCAGGCAAAA
GCTGTGGTAC AGGAATGGTT AAATAACATA GGATTGGAAC TGAAACCGGA AAAAACCAGA
ATTGCTCACA CACTAGAAGA ATATGAAGGG AACCAGCCCG GATTTGACTT TCTAGGATTC
ACAGTTAGGC AGTGGAAGGT AAAAACAAGC AAGCAAGGGT TCAAAACGCT GATCAAACCA
TCCAAACAGA GTATTAATAC TCATTATCGG AAAATGGCAG AGGTATGTGA TACTCATAAA
AGTGCTACTG TCAAGGTATT GATAACTAAG TTAAACCCGA TAATAAGAGA ATGGGCTAAC
TACTTTTCAG CGGTAGTCAG TAATGACATA TTTCAAAAGC TAGACCATCT CTTATTGAGG
AGAATATGGC GATGGGCAAG CCGGAGACAT TCTAATAAGT CAGCAGCCTG GGTGAAAGAG
AAGTACTTTC CTCACAGAGA AGGAACCAAA AGTTGGGTAC TTAAGGATGA GGAATATATA
CTAAATCTAC ACTCTGATGT GTCTATTATA AGACACGTTA AAGTTAAGGA TAATAAATCG
CCCTACGATG GTGACTGGAT TTATTGGAGT AGTAGAATGG TTAACAGTCC AGGCATAAGG
AAAGAAGTTT CGACTCTGTT GAAAAAGCAG AAAGGTAAAT GCGCATTTTG TGGGCTAAGT
TTCAGACCAA CGGATACTAT GGAGGTTTAC CATGTCATTC CGAGGTCTGA AAAGGGTAAT
AGCACAAGCA AGAACAAAGA GTTATTACAT CGACACTGCC ACGATACTAA AACTGCACTA
GAGAGGGAGA CATCCCAGTC GGAAGATTGA
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| Protein sequence | MEKAKTLKRR MDKPESFLSV AWDTDDIPDK ICVNPNLKWR DIDWKKVEKN VFKLQKLIYR
ASSRGEIRKM RKYQKLLIKS HDALLLAVRN VTQDNQGKKT AGIDGIKNLP PMQRLHLVDL
LKSRDLKASP TQKVSIPKTG RNQKRRLGIH SLYDLGLQTL VKLGMEPEWE AHFETNTYGF
RPGRSTDDAI QAIYLSINDE PKYVLNADIS KCMSEVNHHA LLGKIDKSPY RQLVKQWLKS
GVFDKSQFDP PLLELGTPQG EVISPLLANI ALHGMEKCLQ DFAETLPGNK RDNIQALSLV
RYAGNFVILH KDIEVVMQAK AVVQEWLNNI GLELKPEKTR IAHTLEEYEG NQPGFDFLGF
TVRQWKVKTS KQGFKTLIKP SKQSINTHYR KMAEVCDTHK SATVKVLITK LNPIIREWAN
YFSAVVSNDI FQKLDHLLLR RIWRWASRRH SNKSAAWVKE KYFPHREGTK SWVLKDEEYI
LNLHSDVSII RHVKVKDNKS PYDGDWIYWS SRMVNSPGIR KEVSTLLKKQ KGKCAFCGLS
FRPTDTMEVY HVIPRSEKGN STSKNKELLH RHCHDTKTAL ERETSQSED
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