Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0417 |
Symbol | |
ID | 4241922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 654900 |
End bp | 656402 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638105739 |
Product | peptidase M50 |
Protein accession | YP_720353 |
Protein GI | 113474292 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.807166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACAA CATCCGAAAA TACGACTACA ATAATAGTAG CTTTAATTGC TATGGGAATT CTGGGCTGGG GATACTACAG GGCTAGGCCT TATGGAAAAA CTGGCATTTT AGGTTGGTTA CAATCAGTAG TATTAATGAC ACCTTGGCTA GTGTTTTTTG TTCTATTTGC TGCGGGAATT TATCTGAATT TAGTATTGAT TCTATTTATG TTAGTGGCTT GTACAGGATT GTACATCTAT TTGGGTTGGC AATTACGAAT AATAGCAGCT CAAGAAACAG AAAATAAACC TGATATTAAA CCTATTAGTA ACTCCTTACA AGAGTCTTCT AGTGAAGAGA AAACTGAATT AGTAAATAGG GAAGAGAAAA AAGAAGAAAC TCTAGAATTT CTTCCTATTT CCACTGAAGA CTTACAAAAA GTAAAAGACA TTTTTGGTAT TGATACCTTT TTTATTACCG AAACTATCCC CTATCAAGAA GGAGCTATTT TCAAGGGTAA TTTACGGGGA GATATAGAAA AGGTTTATAC TAAATTATCA GCAAAATTGG CCGAAAAACT TGGCGATCGC TACAGACTAT TTTTATTGGA AAGTCCAGAA GCTAAACCAG TAGTAATTCT TTTACCAAGC AAAAATGACC CATTACCTGC CACTACATCC CAAAAAATTC TGGCAGTTAT TCTATTACTT GCGACTATTG CCACCAGTTT TGAAGCGGGT GGGTTATTGT TGGGGTTTGA CTTTTTCAAC CAACCCATGA GATATCAAGA AGCATTACCC ATTGTAATTG GTCTGTGGAT AGTTTTGGGT GGTCACGAAA TTGCTCACCA AGTTTTAGCA AAACTTCACA ATGTTCGCTT TAGTTGGCCG TTTTTTCTGC CCGCTTGGCA AATTGGTAGT TTTGGTTCGG TTAACCGTTT CGAGTCAATA CTCCCTAACC GAAAAGTTCT ATTTGATGTG GCTTTTGCCG GACCTGCTGT TGGAGGAATA ATTTCTTTGG CAATGCTATT AGGGGGTTTG TTACTTTCCC ATGAAGGTAG TCTGTTTCAG ATGCCATCAG AATTTTTTAA AGCTTCTGTT TTGGTAGGAA CTTTAGCACG GGTGATTTTA GGTCCGGCAG TACATCAGAG TATAGTAGAT ATTCACCCAC TAGCAATTAT AGGTTGGTTG GGTTTAGTTA TTACAGCAAT TAATCTGATG CCAGCAGGTC AGTTAGATGG TGGTAGAATT CTGCAAGCAA TTTATGGTCG GAAAGTGGCA GGTAGAGCAA CATTATTTAC TTTTATAGTA TTGGTATTTG CTTCTTTGGT TAATCCTTTG GCGTTGTATT GGGCGATTAT TATTTTGGTA TTACAGCGAA ATTTAGAACG GCCTTGTTTA AATGAATTGG TAGAACCGGA TGATGGTCGG GCAGGTTTGT GTTTGTTGGC TTTATTTTTT GCGATCGCTA CTTTGTTTCC TCTAACTCCA GGTTTAGCTG GTAGGTTGGG TATTGGTAGT TAA
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Protein sequence | MYTTSENTTT IIVALIAMGI LGWGYYRARP YGKTGILGWL QSVVLMTPWL VFFVLFAAGI YLNLVLILFM LVACTGLYIY LGWQLRIIAA QETENKPDIK PISNSLQESS SEEKTELVNR EEKKEETLEF LPISTEDLQK VKDIFGIDTF FITETIPYQE GAIFKGNLRG DIEKVYTKLS AKLAEKLGDR YRLFLLESPE AKPVVILLPS KNDPLPATTS QKILAVILLL ATIATSFEAG GLLLGFDFFN QPMRYQEALP IVIGLWIVLG GHEIAHQVLA KLHNVRFSWP FFLPAWQIGS FGSVNRFESI LPNRKVLFDV AFAGPAVGGI ISLAMLLGGL LLSHEGSLFQ MPSEFFKASV LVGTLARVIL GPAVHQSIVD IHPLAIIGWL GLVITAINLM PAGQLDGGRI LQAIYGRKVA GRATLFTFIV LVFASLVNPL ALYWAIIILV LQRNLERPCL NELVEPDDGR AGLCLLALFF AIATLFPLTP GLAGRLGIGS
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