| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0416 |
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| Symbol | |
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| ID | 4241921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 652941 |
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| End bp | 654566 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638105738 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_720352 |
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| Protein GI | 161485632 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAA TTACAATCTT AGGATCTACA GGGTCTATTG GTACTCAAAC TTTGAACATT
GTGGCTCACA ACCCAAACAA ATTTCGAGTT ATTGGGTTAG CTGCTGGAAG TAATGTAGAA
ATATTAGCCC AACAGGTCAG ACAATTTTGC CCTCAAATTG TTGCTATTAA TGATAAGTCC
AAATTTAGGG AACTACAAGA GGCCATTGCT GACTTGCAGC CTCAGCCTAT ATTGGTTGCT
GACCAAGATG GTGTTATACA AGTAGCTAGA TATGGGGAAT CAGAAGTAGT CGTAACTGGT
ATTGTTGGTT GTGCTGGTTT ATTGCCTACT ATTGCTGCTA TTGAAGCAGG CAAAGATATT
GCTTTAGCAA ATAAAGAAAC ACTTATTGCA GCAGGTCCAG TTGTTAATCC TTTAATTGAA
AAATATAGAG TCAAATTATT ACCAGCAGAC TCAGAACATT CAGCAATTTT TCAATGTCTT
CAAGGTTTAC CATTAGAGGG TTTGCGCAGA ATTATTTTAA CTGCTTCTGG TGGTGCTTTT
CGAGATTGGC CGATTGAGAA ATTATCAAAA GTAAAAGTGG CAGATGCTAT TAAACATCCT
AACTGGTCAA TGGGTAAGAA AATTACCGTT GATTCTGCTA CAATGATGAA TAAAGGTTTG
GAAGTTATTG AAGCTCATTA TTTGTTTGGA TTGAATTATG ATAATATTGA TATAGTAATT
CATCCTCAAA GCATAATTCA CTCTTTAATT GAGTTACAAG ATACTTCTGT TTTAGCTCAA
CTAGGTTGGC CGGATATGCG TTTGCCTTTG CTTTACGCTT TATCTTGGCC GGAAAGAATT
TATACTGATT GGAAACAGTT AGATTTAGTT AAAGCTGGAA GTTTGACTTT CAAGGAACCT
GATAATTTGA AATATCCTTG CATTCAGTTA GCTTATACAG CTGGTCGTAT GGGTGGTTCT
ATGCCTGGAG TTTTGAATGC TGCAAATGAA CAGGCTGTAG CATTGTTTTT AGAAGAAAAA
ATAGCATTTT TGGATATTCC AAAATTGATT GAATATGTCT GTGAAAAGCA TAATTCAAAT
TATCAAGAAA ATCCTAGTCT AGATGATATT TTGGCAGCAG ATAAATGGGC AAGAAAAGAG
GTTTTAGCAG CAAGTAGTAT AGTAAATAAT TCTCTAATAA ATTTAAGTTT GGTTAATCTT
GAGGAAAATC CCACAGAAAT ATTTACAAAA ATCGAAAATG AGCAGATAGA ATTTAATGAT
TTTTATCAGC GGGGATTAGC TAAATATGAA CAACAAGATT ATCAATCAGC TTTAGCAGAG
TTTGATCGAG CAATAGATAT AGACTCCAGT CATATAGATG CTTATATTTA TAGGGGTGAT
GCTAAAGATA AATTAGAAGA CTATGAGGGA GCAATTGCTG ATTATAATGA GGCAATTAAA
ATAGATTCAA GTCATCCAAA AGCTTATTAT AGTCGGGAAA ATGTACTGCG AAAAGCTGGA
GATAGTAGGG AAGCGATCGC TGATTATGAT CAAGCAATTA AACTAGATCC AAATTATACA
CCTACCAAGA ATTGGAGTCA TGTTCATGTT AACTCAGAAA CTACGGAAAA GTTACGACAG
GAGTAA
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| Protein sequence | MKPITILGST GSIGTQTLNI VAHNPNKFRV IGLAAGSNVE ILAQQVRQFC PQIVAINDKS
KFRELQEAIA DLQPQPILVA DQDGVIQVAR YGESEVVVTG IVGCAGLLPT IAAIEAGKDI
ALANKETLIA AGPVVNPLIE KYRVKLLPAD SEHSAIFQCL QGLPLEGLRR IILTASGGAF
RDWPIEKLSK VKVADAIKHP NWSMGKKITV DSATMMNKGL EVIEAHYLFG LNYDNIDIVI
HPQSIIHSLI ELQDTSVLAQ LGWPDMRLPL LYALSWPERI YTDWKQLDLV KAGSLTFKEP
DNLKYPCIQL AYTAGRMGGS MPGVLNAANE QAVALFLEEK IAFLDIPKLI EYVCEKHNSN
YQENPSLDDI LAADKWARKE VLAASSIVNN SLINLSLVNL EENPTEIFTK IENEQIEFND
FYQRGLAKYE QQDYQSALAE FDRAIDIDSS HIDAYIYRGD AKDKLEDYEG AIADYNEAIK
IDSSHPKAYY SRENVLRKAG DSREAIADYD QAIKLDPNYT PTKNWSHVHV NSETTEKLRQ
E
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