Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0401 |
Symbol | |
ID | 4241965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 627137 |
End bp | 627862 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638105726 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_720340 |
Protein GI | 113474279 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.573387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.48358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAC TAATATTGGC AATTATAATT ATTGTCTCCC AAGGTGGTTG GATAAATTTA GCAAAGGCAG CCAACCCAGG AGCTATTAGA AGACTATTAG AGACTAATGA ATGTTCAGGA TGCGACCTTA CTCAAGCGAA CCTATCTAAT GCTAACTTGA TCGGAGCTGA CTTAGAAGGT GCTAACCTCC GAGGAGCAAA TTTGTCTGGC GCTAACCTAG GGGTAACAAT TCTTTCTAAT GCTAATCTTT CTAATGCTAA CCTTTCTAGA GCAATAATGA ATGATGCAGA TCTTCGAGGT GCAAATTTAA CAGATGCTTA CTTAAGTAAT GCTAATTTAT CCAGAGCTTA TCTCACAAAA GCCAATTTAG AAAATGCTAA TTTATTTGAA GCAAATTTGA TTGAATCTCT TGCTAGTGGA GCTAATTTAT CTAATGCAAA TTTACGTCAT TCATATTGGT TTCGAGCCAA TTTAGAAAAT GCTGATTTGA GAGAATCTGA TCTTTTCAAT GCTAATATGC ATCAAGCAAA TTTGAAGAAT GCAGACTTCT CTAATGCTAA CCTTACTACA GCCAAATTGA TGGAAACAAA TATAACGCTT GCTAATCTAA GTGGAGCAAC TTTAGAAGGG GTTAACCTTC GTGGTACAAG TATAGGTTCA AGTGTATGTT TAATTACCAA TTATATAGGT TGTGCGCCAC CAAAAGTAAT TCCTGAAGTT AAATAA
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Protein sequence | MKLLILAIII IVSQGGWINL AKAANPGAIR RLLETNECSG CDLTQANLSN ANLIGADLEG ANLRGANLSG ANLGVTILSN ANLSNANLSR AIMNDADLRG ANLTDAYLSN ANLSRAYLTK ANLENANLFE ANLIESLASG ANLSNANLRH SYWFRANLEN ADLRESDLFN ANMHQANLKN ADFSNANLTT AKLMETNITL ANLSGATLEG VNLRGTSIGS SVCLITNYIG CAPPKVIPEV K
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