| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0387 |
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| Symbol | |
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| ID | 4241621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 600305 |
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| End bp | 603121 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638105714 |
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| Product | cadherin |
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| Protein accession | YP_720328 |
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| Protein GI | 113474267 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA ACACAAAAAG TATAGTAATA ATAGATGCTA GTGTAGAGAA CTACCAGCAA
TTATTAAACG GAGTCATTCC CGGAGTTAAA CCTTTTCTCC TCGGCGGCGA CACTGACGGT
ATCCAACAGA TAGGGGATAT CCTCCAAAAA CATCCAGAAA CGGATACTCT TCATATTATC
TCCCACGGTT CTCCTGGTTG TCTGTATCTG GGAAATAGCC AATTGAGTTT GGATACTCTC
AAAGGCTATG AGCCCCAACT ACAACAATGG CAACTGGACA ACCTTCTGCT CTATGGTTGT
AACGTCGCTG CCGGGGATGG GGGAGAAGAG TTTATTGATA AGTTGCATCG GTTGACGGGG
GCTGAGATAG CGGCTTCTAA GTCTTTGACT GGGGCGGCAG TTAAAGGGGG GAACTGGGAG
TTGGAGGTGA GGACGGGCCA AACCAAACCC TCTCTGGCAT TGCAAGTAGA AGCGATGGCT
AGCTACTCTG ATACTCTTGA ACTGCAATTT GAATGGGCTA AACATATCGG CGGTCAAGGT
TTGACCTATG TTTATCGCAT AACCACAGAT AGCATCGGCA ATGTTTTGGT GGCGGGTGTT
TTTGATGACA ATATTGATAT CGATGGCGAC GGGAACAATG ATTTTACCTC TAATAAGGAT
AGCAGCACCC GGGATGCTTA TGTAGCCAAG TTCGACAGCA ATGGCAATTG GATCTGGGCT
AAACAGATCG GCGGTAGGGG TTCTGAGGAT ATTAAAACGA TAACCACAGA CAGCAGCGGC
AATGTCTTGG TGGCGGGTGG TTTTGGTGGC AACATTGATA TCGACGGCGA TGGAAACAAT
GATTTTTCCT CTAATAATGA TTCCTCTAAT AATGATGCTT TTGCGGCTAA GTTAGACAGC
AATGGCAATT TGGTCTGGGC TAAACAGATC GGCGGTAGCG TCACTACAGG TAACTATATT
TCTGGCATAA TCACAGACAG CAGTGGCAAT GCCTTGGTGG CGGGTACTTT TAAGGGCAAC
ATTGACATCG ACGGCGATGG GAACAATGAT TTTACCTCTA ATAATGATGG CAGCAACGAT
TCTTATGTAG CTAAGTTTGA CAGCAATGGC AATTTGGTCT GGGCTAAACG TATTGGCGGT
AGCAATGGTA ACTCTTCTGG TGCCATAACC ATAGACAGCA GTGACAATGT CTTGGTGGCG
GGTGGTTTTA AGGGCAACAT TGATATCGAC GATGATGGGA ACAATAATTT TACCTCTAAT
GGGGAGGCGG ATAGTTATGT AGCCAAGTTC GACAGCAATG GCAATTTTGT CTGGGCTAAA
CAGTTCGGCA GTATCCGTGC TGACTATATT AATAGCATAA CCACAGACAG CAACGGCAAT
GTCTTGGTGG GGGGTCTTTT TAATAGCTAC ATTGACATCG ACGGCGATGG GAACAATGAT
TTTACCTCAA TTAGCGACAT CGATGGTTAT GTAGCCAAGT TAGACAGCAA TGGCAATTTG
GTCTGGGCTA AACAGTTCGG CAGTAGCCTT GGTGGGGTTG TTAGGAGCCT GACCACAGAC
AGCAGCGGCA ATGTCTTGGT GGTGGGTAAT TTTAGTGGTG ACGTTGACAT CGACGGCGAT
GGGAACAATG ATTTTACCTC TAATGGTAAT GGTAACCATA CTTTTACAGC CAAGTACGAC
AGCAATGGCA ATTTGGTCTG GGTTAAACAT AATCTACACA ACGCCTACAC CATAACCACA
GACAGCAGCG GCAATGTCTT GATGGTGAGT GATTTTAATG GCAACATTGA CATTGACGGC
GATGGGGACA ATGATTTTAC CTCTAATGGG GACAGGAATG GTTTGGTGGT GAAGTTCTCG
GACGATACTA ACTCCCCTCC CACGGATATC GCCCTCAGCA ACAACACCAT CGACGAAAAC
GTAGCAGCGA ATACCCCGAT AGGCAATCTC TCCAGCACAG ACCCCGATAC TGGAGATACC
TTTACCTACA GTTTAGTCTC AGGTGCCGGA GACACCGACA ACGGAACCTT CAACATCAGC
GGAGACGAAC TAACAATTAA AAGTTCCCCC GACTACGAAA ACAAACCGAG TTACAGCATC
AGAGTTGAAA CCACCGATGC AGCAGGAGAA ACTTATCAGA AGGAATTAAC GATTAACGTT
AACGACCTTT TTGACGGTAA CAGCGGCAAC GACATCCTCC GAGGCACCGC TGCCGCTGAT
TCCATCTACG GTTTAGAAGG GCGCGACAAG TTGTACGGCA AAGGCGGTAA CGATATCATA
TCTGGAGGAG CAGACAGCGA TATCGTTAAA GGTGACAGCG GTGACGACCA ACTCAACGGC
GATGATGGTC GGGACAGGCT TTATGGTGGT ACCGGTAACG ATATCATATC TGGAGGAGAA
GACAAAGACA TCGTTAAAGG TGACAGCGGC GACGACCAAC TTAACGGTGA TGCTGGTCCA
GACAGGCTTT ACGGTGGCAC CGGCAACGAC ATTTTACTCG GAGGAGACGG CAACGACTTA
CTTTATGGTC AAGGCGGAGA CGACGAGCTT AATGGCGGAC CTGGCATGGA CAGACTTTAC
GGCAGTGACG GTATTGATAC CTTTGTCTTA GGGGAGGGCC AGGAACGCGA TAGCATCTAC
AATTTCGCGG TCGGTACAGA TAAAATCAAG TTAGAGGGCA GTCTGAGTTT TGGCCAATTG
CAGATTTTCC CAAGGGGTTC TTCTAGTTTA ATTGAAGTCA CTGCTACTGG AGAAGAATTG
GCTATTGTGT TGGGGGTTAA TGCGGCGGAT ATTAACGACG GCAGCGTATT TATCTAG
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| Protein sequence | MKLNTKSIVI IDASVENYQQ LLNGVIPGVK PFLLGGDTDG IQQIGDILQK HPETDTLHII
SHGSPGCLYL GNSQLSLDTL KGYEPQLQQW QLDNLLLYGC NVAAGDGGEE FIDKLHRLTG
AEIAASKSLT GAAVKGGNWE LEVRTGQTKP SLALQVEAMA SYSDTLELQF EWAKHIGGQG
LTYVYRITTD SIGNVLVAGV FDDNIDIDGD GNNDFTSNKD SSTRDAYVAK FDSNGNWIWA
KQIGGRGSED IKTITTDSSG NVLVAGGFGG NIDIDGDGNN DFSSNNDSSN NDAFAAKLDS
NGNLVWAKQI GGSVTTGNYI SGIITDSSGN ALVAGTFKGN IDIDGDGNND FTSNNDGSND
SYVAKFDSNG NLVWAKRIGG SNGNSSGAIT IDSSDNVLVA GGFKGNIDID DDGNNNFTSN
GEADSYVAKF DSNGNFVWAK QFGSIRADYI NSITTDSNGN VLVGGLFNSY IDIDGDGNND
FTSISDIDGY VAKLDSNGNL VWAKQFGSSL GGVVRSLTTD SSGNVLVVGN FSGDVDIDGD
GNNDFTSNGN GNHTFTAKYD SNGNLVWVKH NLHNAYTITT DSSGNVLMVS DFNGNIDIDG
DGDNDFTSNG DRNGLVVKFS DDTNSPPTDI ALSNNTIDEN VAANTPIGNL SSTDPDTGDT
FTYSLVSGAG DTDNGTFNIS GDELTIKSSP DYENKPSYSI RVETTDAAGE TYQKELTINV
NDLFDGNSGN DILRGTAAAD SIYGLEGRDK LYGKGGNDII SGGADSDIVK GDSGDDQLNG
DDGRDRLYGG TGNDIISGGE DKDIVKGDSG DDQLNGDAGP DRLYGGTGND ILLGGDGNDL
LYGQGGDDEL NGGPGMDRLY GSDGIDTFVL GEGQERDSIY NFAVGTDKIK LEGSLSFGQL
QIFPRGSSSL IEVTATGEEL AIVLGVNAAD INDGSVFI
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