Gene Tery_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0367 
Symbol 
ID4242562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp565744 
End bp566562 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content36% 
IMG OID638105694 
Productphosphonate ABC transporter, inner membrane subunit 
Protein accessionYP_720309 
Protein GI113474248 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3639] ABC-type phosphate/phosphonate transport system, permease component 
TIGRFAM ID[TIGR01097] phosphonate ABC transporter, permease protein PhnE 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA CTCCTAAAAT TACGCCCAAT AAGTTTGATA CTTTACTCCG TCAACAACAA 
AGAAGTTGGT ATATTTTTTT GACTAAAACA TTGATATTAT TAGGTATTAT TTTAGTCAGC
TTTGGGACTG TAGGATTATT GGATGGACAA CGATTATCTG AGGGTATTCC TGATTTAATT
GGGATGGTTG GAGAAATGTT ACCGCCAGAT TTTAGTCGCG CTTTAGACTG GATTAAACCT
TTAATTGATA CTATTGCTAT GAGTATTGCA GGTACAGGTA TGGCTATTGC TCTTTCTATT
CCTCTTTCTT TGGGAGCTGC TCGCAATACT ACTCCTCATC CTGTTGTTTA TTTTCTCTCA
AGAATGATTC TGAATATAGC TAGGGCAATT CCTGAATTAA TTTTAGGAAT AATTTTTGTT
GCAGCAGTTG GATTTGGCAC ACTTCCTGGG GTATTAGCAT TAGGATTTCA TTCAATTGGT
ATGGTGGGAA AATTTTTGGC TGAAGCTATA GAACATACGG ATAATTCTCC TATTGAAGCT
GCAAAATCTG CCGGAGCTAA TCATTTACAA ATTATTTTTC ATGGCATTTT TCCTCAAATT
TTTCCTCAAA TTGCTGACCT AACTTTTTAC CGTTGGGAAT ACAATTTTCG AGCCTCAATG
GTATTAGGTG CTGTAGGAGC TGGCGGCATT GGGTTTGAAA TTATTGGAGC CCTACGTTTA
CTAAAATATG AGGAAGTTTC TGCACTATTA CTGGTCGTGT TAATAATGGT TACTTTAGTT
GATAGTTTAA GTAACTATTT GCGTCAAAAG TTTATTTAA
 
Protein sequence
MKVTPKITPN KFDTLLRQQQ RSWYIFLTKT LILLGIILVS FGTVGLLDGQ RLSEGIPDLI 
GMVGEMLPPD FSRALDWIKP LIDTIAMSIA GTGMAIALSI PLSLGAARNT TPHPVVYFLS
RMILNIARAI PELILGIIFV AAVGFGTLPG VLALGFHSIG MVGKFLAEAI EHTDNSPIEA
AKSAGANHLQ IIFHGIFPQI FPQIADLTFY RWEYNFRASM VLGAVGAGGI GFEIIGALRL
LKYEEVSALL LVVLIMVTLV DSLSNYLRQK FI