| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0363 |
|---|
| Symbol | |
|---|
| ID | 4242558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 556288 |
|---|
| End bp | 561606 |
|---|
| Gene Length | 5319 bp |
|---|
| Protein Length | 1772 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638105690 |
|---|
| Product | filamentous haemagglutinin outer membrane protein |
|---|
| Protein accession | YP_720305 |
|---|
| Protein GI | 113474244 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.387099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTATG CACCCTTTGA TAAAATTTAC AAAATACTCA TAGCTATCCC CTTAACTGGA
CTTTGGGTAT TTGATATTGC TACACTCTTA CCATTCAAAA ACAGCAAAAA TAATGCTAAA
CTCGGAATAA TATCACGGGA ATTATTTTCC CCTAAAACCA CATTAGCTCA ACCATCGACT
GAACCAATAG TTCCTGAAGC CAACTCAACA AACACAGTAG TAACTCCAGT AACACCATCA
AACAATTCTT CCCAAACTCG CTTCGATATT ACAGGTGGAA AGTATTCGGA AGATAATGCT
AATCTTTTCC ATAGCCTTAC TAAATTTAAT CTGGGAGAAA AACAAATTGT TAATTTTATA
TCTAACCCCA ATATCAGAAA TATTTTAACT CGTGTTACAG GTGGAAATAT TTCTATAATT
AATGGTTTAA TTCAGGTAAC AGGGGGAAAT TCTAACTTAT TTATTATGAA CCCTGCTGGT
ATTATTTTTG GTCCAAATTC TAGATTAGAT GTACCTGGAT CTTTTGTTGT AACGACTGGT
TTAAGTATTG GTTTTGATGA TGGTTTGTTT AATTCTACTG GTGAAAATAA CTACGATATT
TTAACAGGAA ATCCCAGTAT TTTTTCCTTT CCTATAAATA ATTCGGGAGT AATAATAAAT
GAAGGTGAAT TCACTGTTAA AGCAGGAGAA AGTGTAGTTT TATTGGGTGG AACAATTATT
AACACAGGTA AAATATCTGC ACCTGGTGGT GAAATTACAA TTTCTGCAGT CCCTGGAAAA
AATTTAGTCC GCATTAGTCA AGAAGGACGT TTATTAAGTT TAGAAATACC AACGGAAAGT
GAAGAAAACT CAAGCACAAA TTCTGCCCAA GAATTAAAAA CGTTCAATTA CTTATCAATA
CCAGAACTTT TAACTGGTAA AAGTGAAGCT ATAGAAACAG CTACTGGAGT AATAGTTAAT
GATGATAATC AAATAGTTTT GGTAGGTTCT AATCAAGTAA TTCCTACAGA TTTAGGTACA
ACTATTGTCT CTGGATTCCT GGATGTTTCT TCAGCAGAAA AATTGGAATT TGCAAACACA
GGTAGAATCA ATATTTTTGG AGAAAAAGTA GGATTATTTG ATGCCAAGCT GAATGCTGGT
GGTATTTATG GGAGTGGAAG TATTCAAATT GGTGGAGATT TTTCAGGTGT AGTAAATATT
CCTAATGCTA CTCGTACTTA TGTCGATGAA AAAACAAAAA TATTTACTAC ATCTTCTTTA
GGTGAGGCAG GTAATGTCAT TATTTCGAGT GCAGAAGAAA CTATATTTTT GGGTAAAATA
GAAGCTATTA GTGATGCCAC AGAAGAGTCT ATAGCGGAAG AAAAAAACTC TAGCAAAAAT
ATAGTAGAAG TTTCTAGTCA AGGAACTTTA ATTTTTGATG GTACTATTAA TTTAGGTTCT
CCAAATACTT TAGGAAATTT ATCCTTAAAG TCGGAAAATA TTAATATTGT AGATGGAAAT
ATTGCTCTAG AAGATAATCC TTTAACTGGA GAAGCAGAAA CAGAATCTCA GATTGCTAAG
TCATCTATAG AAACTATATC AAATACAAAT ATTAGGATTG AAGCATCAGA TAATATAACT
ATTAATAATT TATCTGAAGC TGAGTTAAAC TTTTCAAATG TCAGAGGTAA AATATCATTT
ATAGCAGATA GTGACAAAAA TAATTTCGGG TCATTTAGAA TAGATTCAGA AAATACTATT
AATACTCAAG GAGCAGAAAT TAGTATTTCT GGAAAAACAA TAAATACAGA TAATATTAAT
ACAAAAGGAG GAAAAATAAG TCTGAGTAGT AGTCAAGGTT TTGTTATGAC TAATAACTTA
TCTACTAGCA ACTCCAATAC AACAGTAAAA ACTAATGGAG GAGATATAGA TATTAATGCT
CAGGGAAATA TTACTACAGG AGAAATTAAT TCTAGTGGAG AGTCCAGTGG TGGAAATATT
AATATCAATA GTCAAACAGG TAGCATTAAA ATTACAAGAG TAAATATAGA TACTACTTCT
TCAAATGGCC GGGGTGGAAA TGTCAGAATG AATGCTGCTA CTAATATTGA CATAGAAAAT
ATTAACGCTG AAGGTAAACA AAGTGGTGGA AATATTGAAC TGAGATCTGA AGACACTCTC
AACCTTAGGG TAATATCAAC CTTAAGTGAT AGCAGAGAAA CTGGCAACAT TTCTATTATT
GGAAACGAAA TCAACCTTTT AGGTGGAGAA AATAGCATTA GTAGCAATGG AAAACTGAAC
TTACACTCAG CATCAGAAAA TCACAATATT ACTCTGGGCG GTTTTCAAAA TACAGCAGCA
CTTAACCTCA AAACATCAGA CTTAGCAACT TTTGCAAATG GTTTTACATC TATTACCATT
GGCAAATCAG AAAATTCTGG TACTATTACT ATATATTCTC CAGAAAAAAG TAACAACAAT
GGAGTCATAT TTCGCGATCC GGTGACTCTT CAAGGAGAAA AAGTTACAGG TCAAGGTAAA
ATAACCGGAA TAGATGATGC TAAAATTACG ATAAATGCTA AAGGTGACAT TCTTACTGGC
AATATTTCTG TGCCTGGAGA CATTAGTCTT CGAAGCACTC AAGGAAATAT CAAGACTGGG
AACATGGCTG TAAATATATC AGAAAATAGC ATTGGTAACA TTGATATTGT TACTGGTGGT
GCTATAGAAA CAGGGAAATT AACCACTACA GGAACAACAG CCGGAGGAAA TATAAATCTC
CAGGCAGGCG CTCACTTAAC TACAGGTATA ATAAATTCTA GTGCGACACC AGGAAATGCT
GGAAAAATTC AACTGAGTGC GGAAAATGAT ATTGAAATTA TCTCAATACA AGCAGAAGGT
GGAAATATTG GAGGTAATGT AGAAATTAGT ACGAGAGATG CTTTGAGAAT AGCAGGTACT
TTTTTAAATC AAAATCAGGA GCTGGTTAGC ATTTCTACCG CCGGAGAATT AGCAGGGGGG
AATATTAATA TCAGCACAGG GAAAACACCT TTTACTGTAG GAGATATTAC GACTAACGGT
TCTGTAGGAG CAATTACAGA TGGAAACCTG ATAATTTCAC CAGATCGTTC TCTACCCAAT
AAGTTTAATC TCATTGATAT CCAAAAGAGG GAAAACTCTC AACTACAGGA TAATAACTCT
AGTGAAACTC AAAAAGAAAC AGAGTTACAG ACTCAAAAAA GTCCACTCCA GCCAGACTCA
ACCGCGGATA GCAGTTCTAA TAAAGATAAC CAAGCTTCTG TAGTTACTCA AACTAAGTCT
AGTAATTCTA AGGAAGAAAA TCAAACCAGT GTAGTGACTC AACAAGAATT AGTTGAGCCA
TCAGACAATA TTAAGATAGA TCAGGTAGAA AAAACTCAAA GTTCTATTGA GGAAAATAAT
AAACCATCCT TAAACACAAA CCAAGAAGTA CAGACAGTAT CTCAAGAACC TGTTTCTATT
GAGGAAAATA ATCAACCATC CTTAAGCACA AACCAAAAAG TACAGACAGT TGAGAAAAAT
AATCAACCAT CCTTAAACAC AAACCAAGAA GTACAGACAG TATCTCAAGA ACCTGTTTCT
ATTGAGAAAA ATAATCAACC ATCCTTAAAC ACAAACCAAG AAGTACAGAC AGTATCTCAA
AAACCTGAAG CAAGTTCACA ACGTTTAGAC AGTTCTGAAG TGACTCCCTC TGTTATAGAA
AATGTAGATA ATATCAAATT ATCAAGAAGC TTAGAAGAGC AAACTTCTCC TCCCCCAGTA
CTTGTAGTAG AAAATCAAAA TACAACCACA ATAGAATTAG AAAAAACTGA TAATTTTCCA
CCTGTTCCAG AATTCTTAGA AAATCAAGAA GCAAAAATTA TTGTGGAGGA TATCGAATAT
AGTGAAACTC CAGCAGCTTC TAATAAAATT TTAGAGGATA CCACCTCTAG TTTAAATTCA
GCAGTTTCAA ATCAAACAGT TGCTATAGAA AATCCTGCTC AAGGTAATTT TTCCCAGAAA
CCAACTCCAA CGATAGTTGT AGAAGAAAAT ATTACAACTA CTGCTTCAGA AATTTCTCCC
AAGAATAATT TCCATCAAAT TAGTTTAACA GATACCATAT CTCAGATAGA GCTAACCAGA
CGCAGAGAAT TTACTAATTA TTTAGGAAAA AACATTTCTA AGAGAACTGC TACAGCAACA
AATATCCGCA ATACTCTCAG CAGTGTTGCC AAAATAGATA TCAGACCAGC AATGATATAC
GTCTCCCCAC AACCCAATTA TTTAGAACTA CAATTGTTTT TGCCCAATGG TAAACCAGTT
GTTAAAAGCA TTAAAAAAAA TAGAGATGAG GTAATTGAGG TTGCAAAAAA ATTCACTAAC
CAAATTAGAA CTCCTCGTCA ATTAGATTCT CACAGCTATT TATCAAATGC TAAAAAATTA
TATAAATGGT TGATTGCGCC AATATCTCAA GAATTGGTAG CTTATAATAT TAACATGATC
GTTTTTTCAA TGGATAGTGG TTTGAGAACT ATTCCCATAG CAGCTTTACA TGATGGTCAA
CAATTCCTAG TAGAAAAATA TAGTTTGGGT TTAATCCCTA GTTTTACTTT AACAGATACA
AGATATTTGG GATTAGATGG TTCTCAAGTT TTAGCAATGG GAGCATCTAA GTTTTCTCCT
AATACCAATG AAACTCCTCT ACCTGGAGTA CTTGTAGAAC TTAAAGCTAT TGTGAATAAT
CTTTGGCCGG GTAAGTATTT TTTGAATCAA GAATTTACTC TAGATAACTT GAAGTATGAA
CGCCGAAAAG AAAAATTCAA AATTATTCAC TTAGCTACTC ATGTAGAATT TCATCCAGGG
GGTGCTGATA ATTCTTATAT TCAATTTTGG GATACTAAGC TACCCTTAAA TGAATTACGA
CAGTTACGTT TGCATCGCCC CCAAATTGAA TTATTGGTAT TGAGTGCTTG TACTACTGCA
GTGGGAGATG AAGATGTTGA ATTAGGTTTT GCAGGTTTGG CAGTGCAAGC AGGAGTCAAG
TCGGCTTTGG CAAGTCTTTG GTATGTTAGC GATGCTGGTA CATTAGCTTT GATGACTGAG
TTTTATCAAC ATTTATCAAA AAGACCTATT AAAGCAGAAG CATTACGAAA AGCTCAATTG
GCAATGTTAA GGGGAGATTT GCATTTACAA GATGGTCATA TACTCCGAAA TGGTAATCAG
GGTCTCCCTT TACCACCGGA GTTAGCCATA GGAGGTAGGA GAGATTTATC TCACCCTTAT
TATTGGGCAT CATTTACCAT GATAGGTTCA CCGTGGTAA
|
|---|
| Protein sequence | MNYAPFDKIY KILIAIPLTG LWVFDIATLL PFKNSKNNAK LGIISRELFS PKTTLAQPST
EPIVPEANST NTVVTPVTPS NNSSQTRFDI TGGKYSEDNA NLFHSLTKFN LGEKQIVNFI
SNPNIRNILT RVTGGNISII NGLIQVTGGN SNLFIMNPAG IIFGPNSRLD VPGSFVVTTG
LSIGFDDGLF NSTGENNYDI LTGNPSIFSF PINNSGVIIN EGEFTVKAGE SVVLLGGTII
NTGKISAPGG EITISAVPGK NLVRISQEGR LLSLEIPTES EENSSTNSAQ ELKTFNYLSI
PELLTGKSEA IETATGVIVN DDNQIVLVGS NQVIPTDLGT TIVSGFLDVS SAEKLEFANT
GRINIFGEKV GLFDAKLNAG GIYGSGSIQI GGDFSGVVNI PNATRTYVDE KTKIFTTSSL
GEAGNVIISS AEETIFLGKI EAISDATEES IAEEKNSSKN IVEVSSQGTL IFDGTINLGS
PNTLGNLSLK SENINIVDGN IALEDNPLTG EAETESQIAK SSIETISNTN IRIEASDNIT
INNLSEAELN FSNVRGKISF IADSDKNNFG SFRIDSENTI NTQGAEISIS GKTINTDNIN
TKGGKISLSS SQGFVMTNNL STSNSNTTVK TNGGDIDINA QGNITTGEIN SSGESSGGNI
NINSQTGSIK ITRVNIDTTS SNGRGGNVRM NAATNIDIEN INAEGKQSGG NIELRSEDTL
NLRVISTLSD SRETGNISII GNEINLLGGE NSISSNGKLN LHSASENHNI TLGGFQNTAA
LNLKTSDLAT FANGFTSITI GKSENSGTIT IYSPEKSNNN GVIFRDPVTL QGEKVTGQGK
ITGIDDAKIT INAKGDILTG NISVPGDISL RSTQGNIKTG NMAVNISENS IGNIDIVTGG
AIETGKLTTT GTTAGGNINL QAGAHLTTGI INSSATPGNA GKIQLSAEND IEIISIQAEG
GNIGGNVEIS TRDALRIAGT FLNQNQELVS ISTAGELAGG NINISTGKTP FTVGDITTNG
SVGAITDGNL IISPDRSLPN KFNLIDIQKR ENSQLQDNNS SETQKETELQ TQKSPLQPDS
TADSSSNKDN QASVVTQTKS SNSKEENQTS VVTQQELVEP SDNIKIDQVE KTQSSIEENN
KPSLNTNQEV QTVSQEPVSI EENNQPSLST NQKVQTVEKN NQPSLNTNQE VQTVSQEPVS
IEKNNQPSLN TNQEVQTVSQ KPEASSQRLD SSEVTPSVIE NVDNIKLSRS LEEQTSPPPV
LVVENQNTTT IELEKTDNFP PVPEFLENQE AKIIVEDIEY SETPAASNKI LEDTTSSLNS
AVSNQTVAIE NPAQGNFSQK PTPTIVVEEN ITTTASEISP KNNFHQISLT DTISQIELTR
RREFTNYLGK NISKRTATAT NIRNTLSSVA KIDIRPAMIY VSPQPNYLEL QLFLPNGKPV
VKSIKKNRDE VIEVAKKFTN QIRTPRQLDS HSYLSNAKKL YKWLIAPISQ ELVAYNINMI
VFSMDSGLRT IPIAALHDGQ QFLVEKYSLG LIPSFTLTDT RYLGLDGSQV LAMGASKFSP
NTNETPLPGV LVELKAIVNN LWPGKYFLNQ EFTLDNLKYE RRKEKFKIIH LATHVEFHPG
GADNSYIQFW DTKLPLNELR QLRLHRPQIE LLVLSACTTA VGDEDVELGF AGLAVQAGVK
SALASLWYVS DAGTLALMTE FYQHLSKRPI KAEALRKAQL AMLRGDLHLQ DGHILRNGNQ
GLPLPPELAI GGRRDLSHPY YWASFTMIGS PW
|
|---|
| |