Gene Tery_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0331 
Symbol 
ID4243146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp504317 
End bp505921 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content32% 
IMG OID638105663 
ProductABC transporter related 
Protein accessionYP_720278 
Protein GI113474217 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTACTAG TAATTGTTTT ATTAGGAACA TTTACTGTAT TTAATTTATT CCTCACAAAT 
CAACGAGCAG AATTTATTTC TGCACTATCT TCTCAAAATT CTGAGAGATT TTGGCGATCA
ATTATACAGT TTTTTGGCGC AGTTGTGATT GCTGTACCTT TTGTATCTTC CTATTCTTTT
GTTCGACAAA AACTTAGTGT ATTTTGGCGA AGGTGGATGA CTGAGAGTTT TATGGAAAGT
TATTTAAGCG ATCGCTCTTT CTATAAAATT AGTTACCACC CAGAAATTGA TAATCCAGAC
CAACGTATTG CTCAAGATAT TAAAAGTTTT ACAGACCAAT CTCTAAGTTT TCTTGTAATT
ACTCTCAATG CCATATTTCA GTTATTTGGT TTTAGTACTT TATTATGGTC AATTTCTAAA
CCATTAGTAT TTTTTGTAAT TGCTTATGCT ATTGCTGGTA CAGTTATCAC GACCGGAGTA
TTTGGTAAGG TTTTGGTAGA GATTAATTTT GAACAATTGA AGCGAGAAGC TAATTTTCGT
TTTGGTTTAA TTAGAGTTAG AGAAAATTCT GAATCTATAG CTTTTTATAG AGGAGAGAAA
CAGGAACTAC AACAGGCAAA GAACATATTT AATGATGTTT TTAATAATTT TAATCGGTTA
ATTCAATGGC AACTATATTT GGATATTTTT AGAAATAGTT ATGAATTTAT TACTTTTGCA
TTACCATCTA TAATTATTGG TCCCCGTGTG CTTTCTGGTG AATTAGAAAT AGGTGTAATT
ACTCAAGCCG GAGTAGCTTT TAGTATCATC TTAAGTTCCT TAACAGTTAT TGTTAGTCAA
TTGGATAGAC TGACAGAATT TGCTGCTGGA ATTAATCGTT TATCTACTTT TTCTGAGGCT
ATTCAATCAT CTACTGAAGT TCCTAAAGGT GAATTAGCTA TTGATACAAT AACAAATTCT
TGTCTAGCTT TAGAACATTT AACATTAAAA ACTCCCAATT ATCAAAGAAC TTTATTCAGA
GATATTTCCT TAGAAATAAA ACCAGGAGAT GGATTATTAA TTATGGGACC TAGCGGTTGT
GGCAAAAGTT CAATTTTAAG AGCGATCGCT GGTCTATGGA ACTCTGGCAC AGGAGCTATT
TATCGACCTA AATTGAATGA AATATTATTC TTGCCTCAAA AACCTTATAT GGTTTTAGGC
TCTCTCCGTC AACAGCTTTT ATATCCCCAG AGTAATCTAA ACATTTCTGA TGTAAAAATA
CAGGAAGTCT TAGAAAAAGT AAATCTCACC AAATTAGCAG AAAGATTTGG TGGTTTAGAT
GCAGAAGAAA ATTGGAGTCA AGTTTTGTCA GTGGGAGAAC AACAAAGAGT TGCCTTTACT
AGATTATTAT TAACTCAACC TAAATATGTA ATTTTGGATG AAGCCACCAG TGCTTTAGAT
GTGCCAACTG AGGAAATTTT ATATAAACAA TTGCAAGAAA CATCCATAAC ATTTATTAGT
GTTGGACATC GCCCGACTTT AAAAAAATAT CATCAACAAT TACTAGAAAT TACTGCGAAC
GAATCTTGGC AACTTAAGCC TATTATAACC TTAGATAAAA GATAA
 
Protein sequence
MLLVIVLLGT FTVFNLFLTN QRAEFISALS SQNSERFWRS IIQFFGAVVI AVPFVSSYSF 
VRQKLSVFWR RWMTESFMES YLSDRSFYKI SYHPEIDNPD QRIAQDIKSF TDQSLSFLVI
TLNAIFQLFG FSTLLWSISK PLVFFVIAYA IAGTVITTGV FGKVLVEINF EQLKREANFR
FGLIRVRENS ESIAFYRGEK QELQQAKNIF NDVFNNFNRL IQWQLYLDIF RNSYEFITFA
LPSIIIGPRV LSGELEIGVI TQAGVAFSII LSSLTVIVSQ LDRLTEFAAG INRLSTFSEA
IQSSTEVPKG ELAIDTITNS CLALEHLTLK TPNYQRTLFR DISLEIKPGD GLLIMGPSGC
GKSSILRAIA GLWNSGTGAI YRPKLNEILF LPQKPYMVLG SLRQQLLYPQ SNLNISDVKI
QEVLEKVNLT KLAERFGGLD AEENWSQVLS VGEQQRVAFT RLLLTQPKYV ILDEATSALD
VPTEEILYKQ LQETSITFIS VGHRPTLKKY HQQLLEITAN ESWQLKPIIT LDKR