Gene Tery_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0302 
Symbol 
ID4242904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp461870 
End bp463597 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content39% 
IMG OID638105639 
Productflavin reductase-like, FMN-binding 
Protein accessionYP_720254 
Protein GI113474193 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0426] Uncharacterized flavoproteins
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.225736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.971222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCAA TAACAGATCC AGTCAAAAAT AGACTGACAA TAGAGACAAA TAAAATTGCC 
TCTGATACAA TGGCCATTCG TTCTCTAGAT TGGGACCGCG ATCGCTTTGA TATAGAATTT
GGTCTACAGA ATGGTACCAC ATATAACTCC TTTATCATTC AAGGAGAAAA AACTGCTTTG
GTGGATACAT CCCATGGAAA GTTTCGCCAA TTGTACCTAG ATACTCTATT GGGTCTGATC
AAACCTACCG AAATAGATTA CTTAATTATT AGTCATACTG AACCCGATCA TAGTGGTTTA
GCTAAAGACA TTATTGAACT AGCTCCACAA ATTACAGTAG TTGGGGCAAA AATAGCAATT
CAATTTTTAG AAAATTTAAC TCATATACCA TTTAAAAAAC AAATTGTCAA AAATGGAGAT
CAACTGGATT TAGGTAATGG TCACGTTTTA GAATTTGTTT CAGCTCCCAA TTTACATTGG
CCTGATACAA TATTTAGCTA TGATCGTAAA ACCCAAACCC TATTTACCTG TGATGCTTTT
GGGATGCACT ATTGCTCAGA CAAAACTTAT GATGAAACTC TCAGTGATAT AGAAGCAGAT
TATAAATTCT ATTATGAATG TCTCATGGCC CCCAATGCTC GCTCAGTTTT AAATGCCATG
AAACGCATGA AGGCACTGGG AGATATCAAT ACTATTGCGA CAGGTCACGG TCCTCTCCTA
CGTCATAACT TAGTAGAACT AACAAACCGT TATCAGGAGT GGAGTCAAGC AAAAAGCAAA
GCAGAAAAAA CAGTAGCAGT ATTCTACATT TCTGATTATG GTTATAGCGA TCGCCTCTCC
CAAGCTATTG CCCATGGGAT AATCAAAACA GGGGTAGCTG TAGAAATGAT GGACTTAAAG
TCTGCTGATC CCCAAGAGGT TAGAGAACTG GTAGAAATGG CCAAAGGAAT TGTGATTGGA
GCTCCTCCCA GTACAGGTCC TATCGCTACT ACTGCGGAAA TAGGCATCAG CACTATTTTA
GCAGCAGCTA ATAAAAAACA AACATTTGGC TTATTTGAAT CAGGTGGAGG GGATGACTTA
TCTATTTATC CTCTTGCTAT CCAGTTTAAA GGACTAGGGC TCAAGCAAGC ATTTCCTAAT
ATTACAATCA AAGAAACACC CTCAGAATTA ACTTACAAGT TGTGTGAAGA AGCTGGAACA
GATGCAGGAC AACTTTTGAG TATCAAGGAA AATATTAAGC AGATGAAATC CCTTGATAGT
GGCCTGGATA AGGCTTTAGG TCGCCTGAGT GGAGGTTTGT ATATTATTAC TGCTAGTAAA
GGTGAGGTTA GTAGTGCCAT GTTAGCTTCT TGGGTAGTGC AAGCTAGTTT TAAACCATTG
GGAGTTTCTA TCGCAGTAGC AAAGGATCGA GCTATTGAGG CACTAATGCA AGTAGGCGAT
CGCTTTGTCT TAAATGTATT GCGAGAAGAT AACTATCAAT ATTTGATGCG ACATTTTTTG
AAGCGCTTTA AACCTGGTGC AGACCGTTTT GCAGGGGTAA ATACTCAAAC TGCTAATAAT
GGTAGCCCCA TTTTGAGTGA TGCTCTAGCT TATTTAGAGT GTGAAGTGGC AACTCGGATG
GAGGCAAGTG ACCATTGGAT TATTTATGCG ACTGTTGATA ATGGGCGAGT TAGTGACTCA
GATGTTTTGC CTGCAGTGCA TCATAGAAAA GTAGGTAATC ATTATTAA
 
Protein sequence
MVAITDPVKN RLTIETNKIA SDTMAIRSLD WDRDRFDIEF GLQNGTTYNS FIIQGEKTAL 
VDTSHGKFRQ LYLDTLLGLI KPTEIDYLII SHTEPDHSGL AKDIIELAPQ ITVVGAKIAI
QFLENLTHIP FKKQIVKNGD QLDLGNGHVL EFVSAPNLHW PDTIFSYDRK TQTLFTCDAF
GMHYCSDKTY DETLSDIEAD YKFYYECLMA PNARSVLNAM KRMKALGDIN TIATGHGPLL
RHNLVELTNR YQEWSQAKSK AEKTVAVFYI SDYGYSDRLS QAIAHGIIKT GVAVEMMDLK
SADPQEVREL VEMAKGIVIG APPSTGPIAT TAEIGISTIL AAANKKQTFG LFESGGGDDL
SIYPLAIQFK GLGLKQAFPN ITIKETPSEL TYKLCEEAGT DAGQLLSIKE NIKQMKSLDS
GLDKALGRLS GGLYIITASK GEVSSAMLAS WVVQASFKPL GVSIAVAKDR AIEALMQVGD
RFVLNVLRED NYQYLMRHFL KRFKPGADRF AGVNTQTANN GSPILSDALA YLECEVATRM
EASDHWIIYA TVDNGRVSDS DVLPAVHHRK VGNHY