Gene Tery_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0300 
Symbol 
ID4242902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp459720 
End bp460340 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content32% 
IMG OID638105637 
ProductTenA family transcription regulator 
Protein accessionYP_720252 
Protein GI113474191 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGTC AAGAACTCTT AAAAAAATAC TCTGAACAAT GGCAAGCAGC TACTGTACAT 
CCATTTTTAA ATGAATGTAA ATTAGGTACT ATTAAACCTA AACAATTTAA TACTTGGCTA
GTACAAGATT ATTTATTTGT TGTGGAGTTT ACTCGAATGG TAGGTAGAAT TTTAACCTAT
GCTCCAACTT CTCATTTTGA TGTGATTCTT ATGGGAATAA ATGCTTTGCA AGATGAACTA
AATTGGTTTC AAGATAAAGC CAGAGAAAGA CAATTAAATT TGAATATTGA AAAACAATCT
ACTTGTGCAG AATACGGCAT TTTTATGAAT AAACTAACAG AAATGCCATA CCCAATACAA
GCAACTGCAT TATGGGAAAT TGAATTAGCT TATAATCAAG GTTGGCAATT ACCAGGAGAA
ATGTTAATGC CTTATAATGA ATTTGCCAAT CGTTGGGGAA ATCCAGAATT TACAAACTAT
GTTAAACTAT TAGAGGCACA AGCTAATGAT GTATTGGCAA GTGCCTCAAA AACAGTACAA
AGTCAATCTG AAGCTACTTT TTTAAATGTC GCTAGACTGG AAAAAGATTT TTGGCAAATG
GCGTATAATG CGACTAATTA A
 
Protein sequence
MNCQELLKKY SEQWQAATVH PFLNECKLGT IKPKQFNTWL VQDYLFVVEF TRMVGRILTY 
APTSHFDVIL MGINALQDEL NWFQDKARER QLNLNIEKQS TCAEYGIFMN KLTEMPYPIQ
ATALWEIELA YNQGWQLPGE MLMPYNEFAN RWGNPEFTNY VKLLEAQAND VLASASKTVQ
SQSEATFLNV ARLEKDFWQM AYNATN