| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0286 |
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| Symbol | |
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| ID | 4242141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 440975 |
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| End bp | 442579 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638105624 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_720239 |
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| Protein GI | 113474178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0581996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA TCTGGATTTA CGATACAACT CTGCGGGACG GTGCCCAACG AGAAGGATTA
TCCCTATCCT TAGAAGATAA ATTACGTATT GTCCACCAGC TCGACAGTTT AGGGATTCCC
TTTATCGAAG GCGGTTGGCC TGGAGCCAAT CCTAAAGATG TACAATTTTT TTGGCATCTC
AAAGAGCAAC CCCTAACTCA AGCAGAAGTC GTAGCATTTT GTTCCACCCG ACGTCCTGGA
AAACAAGCAG CATCAGATCC TACTCTCCAA CCTATCTTGT CTGCGGGTAC ACGGTGGGTA
ACAATTTTTG GTAAATCTTG GGACTTGCAC GTTACTGAAG GGTTAAAAAC TACTCTTGAA
GAAAATTTAG AGATGATTTC AGATACAATT TCCTATCTGT GTAGTCAAGG TTGTCAGGTT
ATTTACGATG CTGAACATTG GTTTGATGGT TACAAACATA ACCCCAATTA TGCTTTACAA
ACTTTAACTG CTGCCAAAAA TGCAGGGGCT CAATGGTTAG TTCTATGCGA CACGAATGGA
GGAACCCTAC CACACGAAGC TACTCAAATA GTAGCAGATG TTTCTAGAGA GTTACCTAAT
ACTAGATTAG GTATTCACAC TCATAATGAT TCTGGTACTG CTGTGGCTAA TGCCTTGTCT
GCAGTGATCG AAGGAGTACA GATGGTGCAG GGAACTATTA ATGGTTATGG GGAGCGTTGT
GGTAATGCTA ATCTCTGTAC TTTAATTCCT AATTTACAAA TTAAGTTGGG TTATGATTGT
ATTCAATCAC AAAAACTGGA AAAACTGACT CAGGTCAGTC GAGGTATTAG TGAAATAGTT
AATCTTGCTC CTGACGACCA TGCACCATTT GTAGGTTTAT CAGCTTTTGC TCATAAGGGT
GGTATTCATG TGTCTGCGGT GGAACGTAAC CCTCTAACTT ATGAACATAT TCAACCCCAA
GAAGTAGGTA ATACTCGTCG TATTGTGATT TCTGACCAAG CAGGTTTGAG TAATGTGTTA
GCAAAGGCAA AAAGTTTTGG CATAGAACTA GATCGCCAAA ACCCAGCTTG TCGAAAAATT
TTGGATAAGT TAAAAGAGTT GGAAAATCAG GGGTATCAAT TTGAGGCAGC GGAGGCCAGT
TTTGAGTTAT TAATGCGAAG TGCTTTGGAG CGAAGGCAGC ATTTTTTTGA GATTAAAGGT
TTCCAGGTAC ATTTAGATAA GGAGAGTGCT AAGGTTTCTA ATTCTCTGGC AACGGTGAAG
GTTGCTGTTG ATGGTAGGGA TATTCTCGAA GCTGCTGAAG GAAATGGTCC GGTTTCTGCT
TTGGATACTG CTTTACGGAA GGCTTTAGGA AATTTTTATC CAGCGATCGC TAATTTTTAC
TTGACAGACT ATAAGGTGAG AATTTTGGAT AGTGGAGCGG GTACTTCTGC TAAGACTAGG
GTGTTAATTG AGTCGAGTAA TGGTCAACAA CGGTGGACTA CTGTGGGAGT TTCTACTAAT
ATTTTGGATG CTTCTTATCT CGCTGTTATT GAAGGTTTGG AGTATGGTTT GATGTTGGAA
AGTCAGTCTC AAGAAAATGC GGTCAGTGTA GTGATCGTAA ACTGA
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| Protein sequence | MNKIWIYDTT LRDGAQREGL SLSLEDKLRI VHQLDSLGIP FIEGGWPGAN PKDVQFFWHL
KEQPLTQAEV VAFCSTRRPG KQAASDPTLQ PILSAGTRWV TIFGKSWDLH VTEGLKTTLE
ENLEMISDTI SYLCSQGCQV IYDAEHWFDG YKHNPNYALQ TLTAAKNAGA QWLVLCDTNG
GTLPHEATQI VADVSRELPN TRLGIHTHND SGTAVANALS AVIEGVQMVQ GTINGYGERC
GNANLCTLIP NLQIKLGYDC IQSQKLEKLT QVSRGISEIV NLAPDDHAPF VGLSAFAHKG
GIHVSAVERN PLTYEHIQPQ EVGNTRRIVI SDQAGLSNVL AKAKSFGIEL DRQNPACRKI
LDKLKELENQ GYQFEAAEAS FELLMRSALE RRQHFFEIKG FQVHLDKESA KVSNSLATVK
VAVDGRDILE AAEGNGPVSA LDTALRKALG NFYPAIANFY LTDYKVRILD SGAGTSAKTR
VLIESSNGQQ RWTTVGVSTN ILDASYLAVI EGLEYGLMLE SQSQENAVSV VIVN
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