| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0280 |
|---|
| Symbol | |
|---|
| ID | 4242135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 431615 |
|---|
| End bp | 432115 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638105620 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_720235 |
|---|
| Protein GI | 113474174 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4244] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.769802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0401474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGAGT ATCTACCACC TTTAAACGAA CATAATTTAC CCTATCCAGA TACAATACAT
CCCATCGTTG TCCACTTCGT AATTGCGATG GTATTATTTG CGTTACTATG TGACATTATT
GGTTATTTCA CTCGTAATTT CCGTTTATAT GAAGTTAGCT GGTGGAACAT GTTTTTCGCC
ACCATTTCTA TTTTTATTGC CATAATATTT GGTCAGTTTG AAGCTGGTCT GGCACAACCC
TACGAAGCGG TTGAACCTAT CTTAAACTTA CATACATTAA TTGGTTGGTC TCTCTCAGGA
ATTATCGCGG CTCTCACTGC TTGGCGTTAT GTGATTCGTT CTAATAACAC AGAAAAATTA
CCGATGCCAT ATCTAGGACT AGGATTAGTA CTAGTAGGAA TAGTCTGCCT TCAAGTTTAC
TTGGGAGATG AATTAGTTTG GGTTTATGGA CTACACACAG TGCCAGTAGT GGAAGCAATA
AAGGAGGGAA TTTTACAATG A
|
|---|
| Protein sequence | MWEYLPPLNE HNLPYPDTIH PIVVHFVIAM VLFALLCDII GYFTRNFRLY EVSWWNMFFA
TISIFIAIIF GQFEAGLAQP YEAVEPILNL HTLIGWSLSG IIAALTAWRY VIRSNNTEKL
PMPYLGLGLV LVGIVCLQVY LGDELVWVYG LHTVPVVEAI KEGILQ
|
|---|
| |