Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0273 |
Symbol | |
ID | 4241640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 422371 |
End bp | 423588 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638105613 |
Product | major facilitator transporter |
Protein accession | YP_720228 |
Protein GI | 113474167 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.473201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.019317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA AAACAGTATC TCAAAACATA AAAAACTCCA TCAAAATTTA TCAAGATTCT AATTTTCAGA TTATTATTGG AATCATTTCA ATGGCAATTT TAGGTGGTCC TGGTATAAGC CCTCTTTTAC CTTCAATAGC TAAAAATTGG AACATTTCTC CCGAACATAT TGGTTGGGTA ATCTCAGCAT TTTTTATTCC TATTACTATA GGTACTCCAA TCTCTGGAAT ATTAGCAGAT CGTTATGGCA GAAAACAAAT TTTGATACCT GCCTTAATCT TATTTGCAAT TAGTGGAACC CTTTGTTCAT TAGCTCCCAA TTTTCAGACC TTAATAGGGC TTCGTTTTGT ACAAGGAATT GGCGCAGCAC CACTAGAGTC ATTAACTTTA ACATTAATTA GTGACTTTTA TAGCGGTAAG TTGCTAACAA CAGCCATGGC TTTTAAGACC ATGAGTGTTG GTCTTAGTTT AGTGATTTAT CCTTTAATTA GTAGTGGATT AACTACCTGG GGATGGCGGT ATCCTTTCTT ATTATATTTA ATAGCTATTC CCTTAAGTAT TTGGATTTTA TTTTCTTTAA AAAATCCAGC TATACCTAAG CAAAAATCAT TTAACTTAAA AAAATATTTG AGAAATATTT GGCAAAGTTT TAATAATTAT CAAGTTAGGA GTTTATTAAT AGTAATTATT GTAAACTTTA TATTTTCATT GGGTCCTTGC TTAACTTATA TACCTCTATT TGCCGATCGC CAGTTAGGAG CTTCTTATAT TGTCATCGGA ATTATTTTAG CCAGCAGAGG TATTTTTTTA GCATTTGCTT CATCTCAATT AGGGATATTT GCCAAGTACC TATCTGAACT GACCCTGATA AAAATTTCAT TTATTATTTA TTGTATTGCT TTTATAATGA TTCCCACAAT AAATAATATT TGGCTGTTAT TTATTCCTGG CATTTTATTA GGTTTAGCTC ATGGTATGTT AGTTCCCTCA ACCCAATCTT TATTAGGGCA ATTATCTCCC GAAAATTATC GAGCAGGTTT TATGGCAGTT ACTTCATCAG CTTTATCTTT CGGGCGAACT TTAGGTCCAA TTCTAGCAGG AAGTATGTTT TATATTGGGG GAATGGCAGG AGTATTTTAT AGCAGTTCAA TTGTGAGTTT AGTTATTTTT GTTTTTATCA GTTATCTAGT TATAAATACC CAATCCATAA AAAGTTAA
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Protein sequence | MSKKTVSQNI KNSIKIYQDS NFQIIIGIIS MAILGGPGIS PLLPSIAKNW NISPEHIGWV ISAFFIPITI GTPISGILAD RYGRKQILIP ALILFAISGT LCSLAPNFQT LIGLRFVQGI GAAPLESLTL TLISDFYSGK LLTTAMAFKT MSVGLSLVIY PLISSGLTTW GWRYPFLLYL IAIPLSIWIL FSLKNPAIPK QKSFNLKKYL RNIWQSFNNY QVRSLLIVII VNFIFSLGPC LTYIPLFADR QLGASYIVIG IILASRGIFL AFASSQLGIF AKYLSELTLI KISFIIYCIA FIMIPTINNI WLLFIPGILL GLAHGMLVPS TQSLLGQLSP ENYRAGFMAV TSSALSFGRT LGPILAGSMF YIGGMAGVFY SSSIVSLVIF VFISYLVINT QSIKS
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