| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0270 |
|---|
| Symbol | groEL |
|---|
| ID | 4241637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 415937 |
|---|
| End bp | 417622 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638105611 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_720226 |
|---|
| Protein GI | 113474165 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0578222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA TTGTAGAATT TGATGATAAG TCCAGACGCT CTCTAGAACG AGGTATCAAT
ACTCTAGCTG ATGCGGTCAG AATTACTATG GGCCCAAAGG GTAGAAATGT ATTACTAGAG
AAAAAATATG GCGCTCCCCA AATTGTTAAT GATGGTATTA CAGTAGCTAA GGATATTGAA
CTGGAAGACC CTCTAGAAAA CACTGGGGCT AAATTAATTC AAGAAGTGGC GTCTAAAACT
AAGGATATTG CTGGAGATGG CACAACTACA GCTACTGTTT TAGCTCAGTC TATGATTAAA
GAAGGCCTCA AAAACGTAGC TGCTGGTGCG AACCCAGTGG CAGTTCGTAG AGGGATTGAG
AAAACTGTTA GTCTGCTAGT GAAAGAAATA CAAACAGTTG CTAAACCGGT AGAGGGAGAA
GCGATCGCTC AAGTTGCTAC GGTATCTGCA GGTGGTGATG CAGAGGTAGG CAGAATGATT
TCTGAGGCCA TGGATAAAGT TACCAAGGAT GGGGTAATTA CTGTTGAAGA GTCTAAGTCT
CTTTCTACAG ACTTAGAGGT TGTGGAAGGA ATGCAAATTG ATCGCGGTTA TCTTTCTCCT
TATTTTGTGA CTGATCAAGA ACGGTTAGTA GTCGACTTTG AAAATGCTCG CATCTTAATT
ACTGATAAGA AAATCTCTTC TATTCAAGAT TTGGTACCGG TACTGGAAAA AGTTGCTCGT
GCTGGTCAGT CTTTATTAAT TATTGCTGAG GATATTGAAG GGGAAGCTTT AGCTACTTTG
GTGGTTAATA AAGCAAGGGG TGTACTGAAT GTTGCTGCAG TGAAGGCTCC TGGTTTTGGC
GATCGCCGTA AGGCAATGCT CCAAGATATT GCTATTCTCA CGGGTGGTCA ACTCATCTCG
GAAGAGGTTG GTCTGAGTCT AGAGATGGTA GACCTAGATA TGATGGGTAT TGGTCGCAAA
ATTTCTATTA ACAAGGATAA CACAACTATT GTTGCTGATG GGGGAACGGC TGAGGAAGTT
AAAAAGCGGA TCGCTCAAAT TCGCAAACAG CTTGGTGAAA GCGACTCTGA TTATGATAAA
GAAAAGTTAC AAGAGCGCAT TGCTAAGTTA GCTGGTGGGG TGGCAGTCAT TAAGGTTGGT
GCTGCTACTG AAACTGAGCT TAAAGACCGG AAGTTACGCA TTGAGGATGC TTTGAATGCG
ACAAAGGCTG CTGTAGAGGA GGGTATTGTC CCTGGTGGCG GTACTACTTT GATTCACTTG
TCTACTAAAG TGGAGGAGCT AAAAGGTAGT CTCAATAATG AAGAAGAGAA AATTGGTGCT
GATATTGTTA GACGTGCTTT AGAAGCACCT TTAAATCAAA TTGCTAATAA CTCTGGTGTA
GAGGGTTCGG TAATTGTAGA AAAAGTACGT TCTACTGATT TTAGTGTTGG TTACAATGTG
ATAACTGGCG AGTACGAAGA TCTGATTGCT GCTGGTATTC TTGACCCGGC GATGGTGGTA
CGTTCTGCGT TGCAAAATGC GGGTTCTATT GCTGGTATGG TCTTAACTAC TGAGGCTGTG
GTTGTTGAGA AGCCTGAGAA GAAAGGTGCT GCTCCTGATA TGGATGGCGG CATGGGCGGC
ATGGGCGGCA TGGGCGGCAT GGGCGGCATG GGCGGCATGG GTATGCCTGG TATGGGAATG
ATGTAA
|
|---|
| Protein sequence | MAKIVEFDDK SRRSLERGIN TLADAVRITM GPKGRNVLLE KKYGAPQIVN DGITVAKDIE
LEDPLENTGA KLIQEVASKT KDIAGDGTTT ATVLAQSMIK EGLKNVAAGA NPVAVRRGIE
KTVSLLVKEI QTVAKPVEGE AIAQVATVSA GGDAEVGRMI SEAMDKVTKD GVITVEESKS
LSTDLEVVEG MQIDRGYLSP YFVTDQERLV VDFENARILI TDKKISSIQD LVPVLEKVAR
AGQSLLIIAE DIEGEALATL VVNKARGVLN VAAVKAPGFG DRRKAMLQDI AILTGGQLIS
EEVGLSLEMV DLDMMGIGRK ISINKDNTTI VADGGTAEEV KKRIAQIRKQ LGESDSDYDK
EKLQERIAKL AGGVAVIKVG AATETELKDR KLRIEDALNA TKAAVEEGIV PGGGTTLIHL
STKVEELKGS LNNEEEKIGA DIVRRALEAP LNQIANNSGV EGSVIVEKVR STDFSVGYNV
ITGEYEDLIA AGILDPAMVV RSALQNAGSI AGMVLTTEAV VVEKPEKKGA APDMDGGMGG
MGGMGGMGGM GGMGMPGMGM M
|
|---|
| |