Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0269 |
Symbol | |
ID | 4241636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 413407 |
End bp | 415158 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638105610 |
Product | hypothetical protein |
Protein accession | YP_720225 |
Protein GI | 113474164 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0678057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGGA AAATGGATAC TCAACCTTCA AATCAAGGAG CTTCAACTCC TCATACAGCA GAAGAAGTCC TGAAATTAGT GATTCAAGAC TTGGACAATT TTCGTCAAGA TTTGACACAT CAGTTAGGGC AAGATGTAAG TAGATTAAGA GCTGAGAAAG AACAGCTCAA TGAGGATGTT AATAAATTAA GAAAGCAATA TGAACAGTTG CAAGTTCAAC AACTGGAATC TCTTTCTCAA CGACAAATAG CCCAGCAACA ATTATGGCTG AAACAACTGG CCCAAGTACT GGCAAATAAT TTACAAAAAC AGTTAGGCCA TAAAATTAAA GAGTTAAAGG AGAGTGTTGA CCCAGGATTA CAACAAGGTG TTTCTTCAGG AGGAGGGTTA CCAATGACTA ATTCTCCAGA TAACTATTAT GAATCTGCTA ATGAGTTGGG CTCTTCTTTG TCTGCTACTT TGAGCAGAAC ATTTGATACT CTAAAAAAGG AGTTGGATAG TTACGAAAGT GACCTTTGTG TGCAACTAAA TAATATGCGT GGTATGGAAC AGCAGAGTGA GGTGATTTTA GAAACCTTGC TCAGTCGTCT TCAGGGACAA CTAGAAGGTA ATAATGTAGT TTTATCACGA AATTTTCAAA CTTTTCAGTC TGATCCCAGG AATTCATTAA ATAATGCTTC TAGTGAAATA TCAACTCCTA TTGAGTCCCC AGAAATAGCA CAAATAAGCA AACCTGAATC TACTGCAAAA TCTCAAAAGT CTCCTTCTCA AGTTCAGATA GGTTTAATTT TGGCTTTGCT CTCAGCAGCA GTTCTATCTT TATTTAATGT TTGTGTAAAG ATAGTTTTCA ATACACCACC ACAACCATAT CAAGTTTTCG GTGGTTTATT TTCAGTATCA GGATTAATTA ATCCTGATGT TTGGAATTCT TTGTTAATTT TATTACTACG GCAAGGGGTA GTAATGTTAT TGATGCCTTT GGTTGCGACA TTTCTTTATC CTGCTGTTTG GAGTGATATT GAGCATTTAA TCAAATCCAA AAATTTTTCG TTATGGTGGA AAGTTATTGG TAGTGCTTTC TTTTTGTTTT TATCTCAGGT ATTAATATAT ATTTCTATTG GTAATATACC TACTGGTATT GCCATGACAA TTTTCTTTAT TTATCCAATT ATTACTGTTT TATTATCTTG GGGATTATTT GGTGATTCCC CTTCTGTTTT AAGAATTTGT GCGATGGTTA TTATTGGTTT GGGAGGAATT TTAGTTATTC CTGGTGGAGT TGGTAATTAT CAACCAGGAG TTATGGCTGG AGTTGCTGCT AGTATTACTT TTTCTGGATA TATTTTACTA ACACAAATGT CAGCAGGAAA GCTTCATCCT ATTCCTTTTA GTTTAATTAA TTTTGCTGGA ATTTTTGTAT TTTCGGCTTT GGGAATGATG ATGCCTAAAC CTGTAGAATG GTCTGCTAAT TTTGATCCTA GTCTGTGGTC TAATTTAATT GTTATTAGTA TTATTTTAGG GGTTTTAACC ATTTCTAGCT ATGTATTAAA TAGTTTTGCT ATTAAATTTG CTGGAGCGGC AAGAGCATCT ATTATGGGTA CTTTGGGTCC ACCTTTAACT GCTTTAATTG CCCTTTTTAC TATTGGAGAA GCATTAGGAG TAAAAGAGAT TTTTGGGATA ATACTGGTAA TTATTGGTGT GGCAGCGATG AGTTTTGAAA GAATGTTTGG AGTGAAACGA AAGCCTAGTT AA
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Protein sequence | MERKMDTQPS NQGASTPHTA EEVLKLVIQD LDNFRQDLTH QLGQDVSRLR AEKEQLNEDV NKLRKQYEQL QVQQLESLSQ RQIAQQQLWL KQLAQVLANN LQKQLGHKIK ELKESVDPGL QQGVSSGGGL PMTNSPDNYY ESANELGSSL SATLSRTFDT LKKELDSYES DLCVQLNNMR GMEQQSEVIL ETLLSRLQGQ LEGNNVVLSR NFQTFQSDPR NSLNNASSEI STPIESPEIA QISKPESTAK SQKSPSQVQI GLILALLSAA VLSLFNVCVK IVFNTPPQPY QVFGGLFSVS GLINPDVWNS LLILLLRQGV VMLLMPLVAT FLYPAVWSDI EHLIKSKNFS LWWKVIGSAF FLFLSQVLIY ISIGNIPTGI AMTIFFIYPI ITVLLSWGLF GDSPSVLRIC AMVIIGLGGI LVIPGGVGNY QPGVMAGVAA SITFSGYILL TQMSAGKLHP IPFSLINFAG IFVFSALGMM MPKPVEWSAN FDPSLWSNLI VISIILGVLT ISSYVLNSFA IKFAGAARAS IMGTLGPPLT ALIALFTIGE ALGVKEIFGI ILVIIGVAAM SFERMFGVKR KPS
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