Gene Tery_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0269 
Symbol 
ID4241636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp413407 
End bp415158 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content35% 
IMG OID638105610 
Producthypothetical protein 
Protein accessionYP_720225 
Protein GI113474164 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0678057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGA AAATGGATAC TCAACCTTCA AATCAAGGAG CTTCAACTCC TCATACAGCA 
GAAGAAGTCC TGAAATTAGT GATTCAAGAC TTGGACAATT TTCGTCAAGA TTTGACACAT
CAGTTAGGGC AAGATGTAAG TAGATTAAGA GCTGAGAAAG AACAGCTCAA TGAGGATGTT
AATAAATTAA GAAAGCAATA TGAACAGTTG CAAGTTCAAC AACTGGAATC TCTTTCTCAA
CGACAAATAG CCCAGCAACA ATTATGGCTG AAACAACTGG CCCAAGTACT GGCAAATAAT
TTACAAAAAC AGTTAGGCCA TAAAATTAAA GAGTTAAAGG AGAGTGTTGA CCCAGGATTA
CAACAAGGTG TTTCTTCAGG AGGAGGGTTA CCAATGACTA ATTCTCCAGA TAACTATTAT
GAATCTGCTA ATGAGTTGGG CTCTTCTTTG TCTGCTACTT TGAGCAGAAC ATTTGATACT
CTAAAAAAGG AGTTGGATAG TTACGAAAGT GACCTTTGTG TGCAACTAAA TAATATGCGT
GGTATGGAAC AGCAGAGTGA GGTGATTTTA GAAACCTTGC TCAGTCGTCT TCAGGGACAA
CTAGAAGGTA ATAATGTAGT TTTATCACGA AATTTTCAAA CTTTTCAGTC TGATCCCAGG
AATTCATTAA ATAATGCTTC TAGTGAAATA TCAACTCCTA TTGAGTCCCC AGAAATAGCA
CAAATAAGCA AACCTGAATC TACTGCAAAA TCTCAAAAGT CTCCTTCTCA AGTTCAGATA
GGTTTAATTT TGGCTTTGCT CTCAGCAGCA GTTCTATCTT TATTTAATGT TTGTGTAAAG
ATAGTTTTCA ATACACCACC ACAACCATAT CAAGTTTTCG GTGGTTTATT TTCAGTATCA
GGATTAATTA ATCCTGATGT TTGGAATTCT TTGTTAATTT TATTACTACG GCAAGGGGTA
GTAATGTTAT TGATGCCTTT GGTTGCGACA TTTCTTTATC CTGCTGTTTG GAGTGATATT
GAGCATTTAA TCAAATCCAA AAATTTTTCG TTATGGTGGA AAGTTATTGG TAGTGCTTTC
TTTTTGTTTT TATCTCAGGT ATTAATATAT ATTTCTATTG GTAATATACC TACTGGTATT
GCCATGACAA TTTTCTTTAT TTATCCAATT ATTACTGTTT TATTATCTTG GGGATTATTT
GGTGATTCCC CTTCTGTTTT AAGAATTTGT GCGATGGTTA TTATTGGTTT GGGAGGAATT
TTAGTTATTC CTGGTGGAGT TGGTAATTAT CAACCAGGAG TTATGGCTGG AGTTGCTGCT
AGTATTACTT TTTCTGGATA TATTTTACTA ACACAAATGT CAGCAGGAAA GCTTCATCCT
ATTCCTTTTA GTTTAATTAA TTTTGCTGGA ATTTTTGTAT TTTCGGCTTT GGGAATGATG
ATGCCTAAAC CTGTAGAATG GTCTGCTAAT TTTGATCCTA GTCTGTGGTC TAATTTAATT
GTTATTAGTA TTATTTTAGG GGTTTTAACC ATTTCTAGCT ATGTATTAAA TAGTTTTGCT
ATTAAATTTG CTGGAGCGGC AAGAGCATCT ATTATGGGTA CTTTGGGTCC ACCTTTAACT
GCTTTAATTG CCCTTTTTAC TATTGGAGAA GCATTAGGAG TAAAAGAGAT TTTTGGGATA
ATACTGGTAA TTATTGGTGT GGCAGCGATG AGTTTTGAAA GAATGTTTGG AGTGAAACGA
AAGCCTAGTT AA
 
Protein sequence
MERKMDTQPS NQGASTPHTA EEVLKLVIQD LDNFRQDLTH QLGQDVSRLR AEKEQLNEDV 
NKLRKQYEQL QVQQLESLSQ RQIAQQQLWL KQLAQVLANN LQKQLGHKIK ELKESVDPGL
QQGVSSGGGL PMTNSPDNYY ESANELGSSL SATLSRTFDT LKKELDSYES DLCVQLNNMR
GMEQQSEVIL ETLLSRLQGQ LEGNNVVLSR NFQTFQSDPR NSLNNASSEI STPIESPEIA
QISKPESTAK SQKSPSQVQI GLILALLSAA VLSLFNVCVK IVFNTPPQPY QVFGGLFSVS
GLINPDVWNS LLILLLRQGV VMLLMPLVAT FLYPAVWSDI EHLIKSKNFS LWWKVIGSAF
FLFLSQVLIY ISIGNIPTGI AMTIFFIYPI ITVLLSWGLF GDSPSVLRIC AMVIIGLGGI
LVIPGGVGNY QPGVMAGVAA SITFSGYILL TQMSAGKLHP IPFSLINFAG IFVFSALGMM
MPKPVEWSAN FDPSLWSNLI VISIILGVLT ISSYVLNSFA IKFAGAARAS IMGTLGPPLT
ALIALFTIGE ALGVKEIFGI ILVIIGVAAM SFERMFGVKR KPS