| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0264 |
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| Symbol | rplA |
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| ID | 4241630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 409830 |
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| End bp | 410546 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638105604 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_720220 |
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| Protein GI | 113474159 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0248875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0562332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAAAA AAATCTCTCG TAGATTGCAA GAATTAAGAA AAAAAGTAGA AGAGCGACCT
TATGAACCAA AAGAGGCACT CCAACTTTTA AAAGAAACAG CTACAGCCAA ATTTCTAGAA
GCTGCAGAAG CTCATGTTCG TTTAGGGATA GATCCTAAAT ACACAGATCA ACAACTACGA
ACTACAGTAG CTTTACCAAA GGGAACAGGT CAAACTATCC GAATTGCCGT TATTGCCAAG
GGTGAGAAAG TTAACGAAGC TCTAGCAGCA GGAGCAGACT TAGCAGGTTC AGAAGAGCTG
ATCGAACAAA TTAGTAAAGG TATGATGGAA TTTGACAGGT TAATCGCTAC ACCTGATGTG
ATGCCTCAAG TAGCTAAACT AGGACGTTTA CTAGGACCGA GAGGTTTAAT GCCATCTCCT
AAAGGCGGTA CTGTAACTTT TGACTTGACT AAGGCAATTG ACGAATTTAA AGCAGGTAAG
TTGGAGTTTA GGGCAGACCG AAGTGGTATT GTTCATGTTA TGTTTGGTAA AACTTCCTTT
TCAGTAGAAG ATTTACTGAT AAATTTAAAA GCTCTACAAG AGTGTATTGA CCGTAACCGT
CCTTCTGGAG CCAAGGGTCG CTATTGGCGT ACTATATTTG TATCGGCAAC GATGGGTCCT
TCAATTGAAA TTGATGTTAG CTCCCTACAG GATCTAAAAT TAACTGAAGC AGCTTAA
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| Protein sequence | MPKKISRRLQ ELRKKVEERP YEPKEALQLL KETATAKFLE AAEAHVRLGI DPKYTDQQLR
TTVALPKGTG QTIRIAVIAK GEKVNEALAA GADLAGSEEL IEQISKGMME FDRLIATPDV
MPQVAKLGRL LGPRGLMPSP KGGTVTFDLT KAIDEFKAGK LEFRADRSGI VHVMFGKTSF
SVEDLLINLK ALQECIDRNR PSGAKGRYWR TIFVSATMGP SIEIDVSSLQ DLKLTEAA
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