Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0237 |
Symbol | |
ID | 4242392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 368911 |
End bp | 371385 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638105581 |
Product | peptidase M23B |
Protein accession | YP_720197 |
Protein GI | 113474136 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.130715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGAA CATTTCCGAA TCAAACTAAG TCTGTTGCTC AGTGTGAACT TCACACAAAA GCAAGTATGG AACAGCTCAA ACAAACAAAT GTAGATAGTA CTAAGGCTTG TTCCTCAGCT GCAATGATTG GACTTGCTGC TATCTCAACT ACAATGGGTA CATCAGTCAT GATCTTCCCT GGAGATGATG ACTCTGCAGT AGCAGCAGAA CTTCCTCAAG TAGATAAACT TCAATCATAT TCTTATCAAG CAAGAATTTT AGAACTAAAT GGTGCTGGGG TTAATAGCCA AAAAAGTTTA CTGCTGACAC AATTGGGATA TCTAGATACT CAAAGAAATA GTAGTTATGA AGCAGGTGTA ACTCAATCTG AAACCGTTTT ACCTTTGGGC CAAAAACTAG GGGCTTCTTT TTCCCCTGTG GAACTTAAAC CGAAAAAGTT GATACCAGGA CAAATCAATA AGTTGCCTTC TTTAGGATCT CTGGGCAAAT TACAAGGTAA GAAAGCTCTG GGTAATGATT TCAAGCTATT TGAGAAGTTC AAAACAGGAA TTAACCCTAT TCAAGAACAA AAAAAACCCC CAGCAAAAAT TTTGGTGGAG TCGAAGTATG AGGAGTTTGT TTCTGAGCCT GTACACAAGC CTTTTGACTT ATCAAAAAAG AAATTACTAG AAAAAAATAT ATCTCAGAAA TCAGAAAATT TAGTTGTTCC CAAAACATCA CTAGAAATTG CTTCCCCTAA GCTAAATAAT AATTCTGATA CTAAACAAGT AGCTGAGAAT CAAACAGATA TTTCTCAAGA GTCCATTGAA ACTGAAGGAA GAAAACTAGA AGCAGTAGTT ATTGATTCAG AGATAACATC TACACAAGTT TCATTAATGT ACAAAGTTCG TTTTGGGGAC ACATTGAGTT TAATTGCTAA TGAGCACAAT GTATCTGTTG GATTATTGGC TAAATTTAAT CAAATTCAAG ATCCAGACCG AATTGAAGTT GCAAAATTAC TGAAAATTCC TCAGCAATTA CCTTCTCAAT CATTAACTCT AACAAGTTAT AGAGGTGGAA ACTCTACTCA CCTAGAATCA AATTCTTCTG AAAAACAAGA ATTTGTACAA CCAACTCTTG AGACGACAAA CAATCACTTT GATTTTCCAG AAGCTAAGAC ATCTATAATA GAATCTGATG CTCCATCATA TAATAGACTT AATACAAGTG AACCATTAGC TTCAATAAAA GACAGTTCAC ATCTGATTTC TTCCCCTCAA GCTACAGACC AAGACTATCA AATAGATCAT AAGTCAAAAG AATTTATAAC TTCAAGACAG TCCGTTAATA CATATAGCCC CAAAACTCCT CTCGTTAATG GTAAAGTCTG GCCTACTAAT CTAACATCAA AAGTATCCGG GTCAAATTCT TCTACACATT TAGAAAACCA AATCCATCTT AGTAACAAGC AACCTGTTCA GTTATTGCTA ATGGATAGAG ATATTCAAGA TCGTGAATTA ACAATAACTG ATAATCAAGA AAATCCTTAT ACAAATCGTT TAAGGTCAGA AATTGATAGG TTACGACAGG AATATAATGA TCAAAAAGAT TTTGAACAAT CTCAGCTCAC CAATTTAGAA TCAATAAATA CCTCAGTACC TGAAGCACTA TCTTCAGAAA ATAATTTATC TGTTAATGAT CAATTTCCTA TAGATCAGAA CTTTAACAAT GGATCCTTCA AGCCAACTGA GAAACGAGAA ATTAGTAACC CCACTACCAG ACAATGGCCT GAAGAGATAG CAGCTAACGG ACTAGAAAGA AAAAATACTG CTATAGTTCT GGTTGGATCT ATGGAAGAAG ATGAAATTAT TGAATCTCAA GAGTCATCCC TTATACCAAC AGCACCAGAA ACTTATATTC CAGTTGGATC TGTGGTAGAA GATGAAATTA GTGAATCTCA AGAGTCATCG CGTATGGCAG CAGCACCAGA AACTTATAAC CCAGAGCAGA TTCTTAATAA TCCTTCAATC GGAAAAATGG TTTCTCCAGA TTTGCCACCC TTGGGTAAAC CTGATTCTTA TTTACCTGGT GGCTCAATGC AATTTACTGG GTATACCTGG CCGGCAAGAG GAATTCTTAC ATCAGGTTAT GGTTGGCGAT GGGGAAGAAT GCATAGGGGT ATTGATATAG GAGCACCTAC TGGGACTCCA ATTGTTGCAG CAGCTCCTGG TATTGTTACT TATGCTGATT GGGACGGCAG TGGTTACGGT TATCTAGTGG AAATTAAGCA TCCCAATGGT AGTCTCACAC TTTATGCTCA TAACAGCGAG ATTTTGGTTA GAGAAGGTCA AAAAGTGTCT CAGGGTGAGC TAATCGCTAA AATGGGGAGT ACAGGCCGTA GCACTGGACC ACATTTACAC TTTGAAATTC ATCCTCAGGG GAATGGAGCA GTAGACCCTA TGGCCTATCT TCCTTCTAGA ATTGCCTCTA ATTAG
|
Protein sequence | MKRTFPNQTK SVAQCELHTK ASMEQLKQTN VDSTKACSSA AMIGLAAIST TMGTSVMIFP GDDDSAVAAE LPQVDKLQSY SYQARILELN GAGVNSQKSL LLTQLGYLDT QRNSSYEAGV TQSETVLPLG QKLGASFSPV ELKPKKLIPG QINKLPSLGS LGKLQGKKAL GNDFKLFEKF KTGINPIQEQ KKPPAKILVE SKYEEFVSEP VHKPFDLSKK KLLEKNISQK SENLVVPKTS LEIASPKLNN NSDTKQVAEN QTDISQESIE TEGRKLEAVV IDSEITSTQV SLMYKVRFGD TLSLIANEHN VSVGLLAKFN QIQDPDRIEV AKLLKIPQQL PSQSLTLTSY RGGNSTHLES NSSEKQEFVQ PTLETTNNHF DFPEAKTSII ESDAPSYNRL NTSEPLASIK DSSHLISSPQ ATDQDYQIDH KSKEFITSRQ SVNTYSPKTP LVNGKVWPTN LTSKVSGSNS STHLENQIHL SNKQPVQLLL MDRDIQDREL TITDNQENPY TNRLRSEIDR LRQEYNDQKD FEQSQLTNLE SINTSVPEAL SSENNLSVND QFPIDQNFNN GSFKPTEKRE ISNPTTRQWP EEIAANGLER KNTAIVLVGS MEEDEIIESQ ESSLIPTAPE TYIPVGSVVE DEISESQESS RMAAAPETYN PEQILNNPSI GKMVSPDLPP LGKPDSYLPG GSMQFTGYTW PARGILTSGY GWRWGRMHRG IDIGAPTGTP IVAAAPGIVT YADWDGSGYG YLVEIKHPNG SLTLYAHNSE ILVREGQKVS QGELIAKMGS TGRSTGPHLH FEIHPQGNGA VDPMAYLPSR IASN
|
| |