| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_0224 |
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| Symbol | |
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| ID | 4241820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 345347 |
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| End bp | 347230 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638105568 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_720185 |
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| Protein GI | 113474124 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.538127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.909062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAG AATTGAACTT AACTTTAGAG TCAAATGGTC ATAAACCTTT AGAGGTTGAC
TTAGTAACAT TAGAAAAAAG TTTGAAGAAT TCTAACTATC AAGAAACAGC AGTTACAAAG
TTAGATGAAT CTGTTGATGA TTGGTCTTTT GCTACTAAAG AATTATTAGA TGCTTTACCA
CAACGTTGGA CACGAGGATT ACTATATCTT TTAATAGGAT TTGTAGCGAT CGCTCTCCCT
TGGGGAATGT TTTCTCAAGT AGATGAAACT GGTTCAGCTA GAGGACGTTT AGAACCTCAA
GGTGGTACTT TTAAACAAGA GCTAAATTTA ACGTTTACCG CATATACACA AACGGCAAAA
GTTGAGAAAG TTTATGTTAA ACAAGGGGAT AAAATTAAGG CTGGAGATAT TTTAATAGAA
TTAGAATCTC GCCCTATTCA TGACCGACTT GCTCAACTCC AAATTCAACT GCAAAATCAG
AAAAATCGAC TTAGTAAGAT TCAACAACAA AAAAATCAAT TGGAAATTGA ACTTCGTACC
CAAGAACGAC AAAATGAATC TCAAAAATTA GAAAAATTAG CTCAAGTGGG GCAAGCACGA
CAAAACGCAC AATCTCTTAA AACAATGTAC AATTTACAGG AACAAGAAAA ACTGACCCAA
GTTCATCAAG CAGAACAAAA TTTGGCGGCT CTCAGAAGAA CATTAAATTT ACAAAGGGAA
GAAAAATTAG TACAAGTTTA TCAAGCAGAA GAAAATTTGG GAGCTCTTAA GAGAGCGTTG
AGTTTACAGA AAGAAGAAAA AATGGCTCAA TTCAATCAAG CAAAACGACA ATTAAAAGAT
AGTCAAATTG CTTATCAATT ATCAGAAATT CGCTGGGAAA AGGCTATGAA AGAAGTAGAA
CGTTATCGTG GTCTTTGGGA CCAGGGTGTG GTGACGGAAA TACAATTAGT TGAGCATGAA
AATATTGGGC GAGAAAGACA AAGAATGTTG GAGCAAAGTC AAGCAGATAT TGAGCAAGCT
AAATTACGAA TAGAAGAGCA AGAGGGTAGT TATAAGAGGG TTATTCATCA AGGAAAGGCA
GATATTAAGC AAGCTGAATT ACGTTTGGCA GAGCAAAAAG GTAGTTATGA AAGAATTATT
AATCAAGGGG AGGCAGATAT TGAGCAAGCT GAGTTACGTT TGGCAGAACA AAAGAGTAGT
TATGAAATGG TAATTAATCA AGTTAAGGCA GATATTAAGC AGGCTGAATT ACGTTTGAAT
GAGCAAGAAA ATAGCTCTAA AACTATTACT CATTCTGGGA AAATTGCTAT ATCAAAAATA
CAAGAGCAAC TTCAGAGTAT GGATAGTCAA ATTGTTAGTA TTCAAGGAGA AATTGCTCAG
ACAAATAAAG AGATTGATTC TTTAAATTTT CAGTTAGAGC AACGAGTAGT TAGGGCGCAA
CAGGGAGGTA CTATTTTTAA TTTCCCCATC AAAGGTGTGG GAGATGTTGT GCAACAAGGA
GAGATGATAG TGGAGATAGC TCCTAGGGAA ACGAGTCTTT TATTAAAGGC GGATATGGCA
ACTACAGAAA GTGGTTCGTT AAGGGAAGGA ATGGAGGTAA AAATGAAGTT TGATGCCTAT
CCTTTTCAGG ATTATGGTGT AGTTGGGGGA TGGTTGAAAG AGATTTCTCC TACTTCAAAA
ATGCAGGAAA CTGCTGAGGG AAATGTGGCT ATTTATGAGT TAAAGGTTGA GTTGGATGAG
TATTGTATTC CTACTGCTAA TGAGTGTGTT GTTTTGCGTC CGGGGGATAC GGCAACGGCT
GAGGTTGTTG TGCGTCAGCG TCCTTTGATT GATTTTATTC TTGACCCGTT TAAGAAGTTA
CAAAAAGGAG GTTTAGAGTT GTAG
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| Protein sequence | MPQELNLTLE SNGHKPLEVD LVTLEKSLKN SNYQETAVTK LDESVDDWSF ATKELLDALP
QRWTRGLLYL LIGFVAIALP WGMFSQVDET GSARGRLEPQ GGTFKQELNL TFTAYTQTAK
VEKVYVKQGD KIKAGDILIE LESRPIHDRL AQLQIQLQNQ KNRLSKIQQQ KNQLEIELRT
QERQNESQKL EKLAQVGQAR QNAQSLKTMY NLQEQEKLTQ VHQAEQNLAA LRRTLNLQRE
EKLVQVYQAE ENLGALKRAL SLQKEEKMAQ FNQAKRQLKD SQIAYQLSEI RWEKAMKEVE
RYRGLWDQGV VTEIQLVEHE NIGRERQRML EQSQADIEQA KLRIEEQEGS YKRVIHQGKA
DIKQAELRLA EQKGSYERII NQGEADIEQA ELRLAEQKSS YEMVINQVKA DIKQAELRLN
EQENSSKTIT HSGKIAISKI QEQLQSMDSQ IVSIQGEIAQ TNKEIDSLNF QLEQRVVRAQ
QGGTIFNFPI KGVGDVVQQG EMIVEIAPRE TSLLLKADMA TTESGSLREG MEVKMKFDAY
PFQDYGVVGG WLKEISPTSK MQETAEGNVA IYELKVELDE YCIPTANECV VLRPGDTATA
EVVVRQRPLI DFILDPFKKL QKGGLEL
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