Gene Tery_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_0201 
Symbol 
ID4242207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp304605 
End bp306062 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content37% 
IMG OID638105546 
Productaminotransferase, class V 
Protein accessionYP_720163 
Protein GI113474102 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.4286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAA ATTATCTATC TTGGGAAAAT AAAGTCAAAT CTTTCTTTGA CTGTGATGCA 
CTAAATTTTC AGATTACAAA TCGTTTCGGA GAGCAGATTA AATACATTAA CTTAGATAAT
GCTGCCACAA CAACACCTTT AGCAGGAGTG AAACAATATG TTGACCATAT GTTAAATGCT
TATGGCAGTG TACACCGGGG AGCTGGCCAA AAATCCCAGA TTTCAACTCA GAAGTACGAT
CAGAGTCGGG ATATTATTCG TAAATTTGTA GGGGCTTCTC CAGAGAATTA CGTAATTTTT
GCTCAAAATA CTACAGGAGC AATTAATCAA GCAGCATCAC TTTGGGCAAA ACGACCAGGA
AAAATTCTAG TCTCTGATAT TGAACATTCT TCAAATCTAT TGCCTTGGCT GACATGCAAT
AATGTAACTC AATACCGCAC TGCTCCAGAT GGAACTATTA ACCTGGCAGA AATTGAGAAA
ATTCTCAAGG AAAACAAAGA AAAACCTGCG GAAAAAAGAA TTAAATTAGT TACAATTACA
GGAGCTTCTA CTATTACAGG ATATAAACCA CCGATTTATG AAATTGCCAA GTTAGCCCAC
AATTACGGAG CGAAAATTTT CGCTGATCTG TGTCAGCTTA TTCAGCATGA GTGTGTTGAA
ATGCTTCCCG ATGCTGACCC ATGTCATTTG GACTTTGTAG CCTTCTCTGG ACACAAAATG
TATGCACCTT ATGGTACAGG GGTTTTAATT GGGCCAAAAG AGTTTTTTGA TCGTGATTTT
CCTTATCAAA TAGGTGGTGG AAATTTACCC TATATTACTA AAAAACTAGA AATTAAGAGA
TTTTATACTG AGCGGGCGCA TGACCCTGGA ACTCCAAATG CTATGGGAGC AATTGCTATT
GCACAAGCTA TTGAAGTTCT TGAGAAGATA GGAAGAGAAA AAATTGCTGA GTATGAACAT
TTTCTGGTGG ATTATACATT TCAAAAACTA CAAAATATTC CAGGTGTTAT ACTTTATATA
TCGGGAAGTT CCCTAGCTCA TGTAATTCCT TTCGACTTGG AAGGTTTTGA TGGATACTTA
GTTGCAGAAA TTCTAGCTCA AGAATATGGC ATTGGTCTAC GTTCAGGGGC TTTCTGCACA
TACGAATATA TCCGAAAATT AAAAAATATT TCCGACCAAA AAGATCAAGA AATAGCTCAA
GAAGTTGAAA GGGGAATTAC ATGCAATATT CCTACTATCA TCCGCGCTAG CTTTGCAGTC
TATAATACTC TGGCAGACTG CAATAGCTTT GTTGAAGCTA TTTCTCAAAT TACTGCCAAT
GGATTTAAGC ACTATCTGTC TGACTACGAA AAAAATGAGA TAACAGGTGT TTGGAAACTC
AAAGAAAATA CTCCTATCTC AATTGCTAGA AAACAGATAA ATAGAGGCCA AACACTTTTA
GGAACATGCA TAGAGTAA
 
Protein sequence
MDENYLSWEN KVKSFFDCDA LNFQITNRFG EQIKYINLDN AATTTPLAGV KQYVDHMLNA 
YGSVHRGAGQ KSQISTQKYD QSRDIIRKFV GASPENYVIF AQNTTGAINQ AASLWAKRPG
KILVSDIEHS SNLLPWLTCN NVTQYRTAPD GTINLAEIEK ILKENKEKPA EKRIKLVTIT
GASTITGYKP PIYEIAKLAH NYGAKIFADL CQLIQHECVE MLPDADPCHL DFVAFSGHKM
YAPYGTGVLI GPKEFFDRDF PYQIGGGNLP YITKKLEIKR FYTERAHDPG TPNAMGAIAI
AQAIEVLEKI GREKIAEYEH FLVDYTFQKL QNIPGVILYI SGSSLAHVIP FDLEGFDGYL
VAEILAQEYG IGLRSGAFCT YEYIRKLKNI SDQKDQEIAQ EVERGITCNI PTIIRASFAV
YNTLADCNSF VEAISQITAN GFKHYLSDYE KNEITGVWKL KENTPISIAR KQINRGQTLL
GTCIE